Protein–RNA interactions for Protein: Q6DN03

HIST2H2BC, Putative histone H2B type 2-C, humanhuman

Predictions only

Length 193 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H2BCQ6DN03 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
HIST2H2BCQ6DN03 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
HIST2H2BCQ6DN03 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
HIST2H2BCQ6DN03 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
HIST2H2BCQ6DN03 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
HIST2H2BCQ6DN03 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
HIST2H2BCQ6DN03 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
HIST2H2BCQ6DN03 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
HIST2H2BCQ6DN03 AC099398.1-201ENST00000567919 2776 ntBASIC12.49□□□□□ -0.41
HIST2H2BCQ6DN03 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
HIST2H2BCQ6DN03 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC12.49□□□□□ -0.41
HIST2H2BCQ6DN03 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
HIST2H2BCQ6DN03 AL645608.8-201ENST00000606034 2086 ntBASIC12.49□□□□□ -0.41
HIST2H2BCQ6DN03 AP2M1-207ENST00000439647 1950 ntAPPRIS ALT1 TSL 2 BASIC12.49□□□□□ -0.41
HIST2H2BCQ6DN03 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC12.49□□□□□ -0.41
HIST2H2BCQ6DN03 IZUMO1-201ENST00000332955 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
HIST2H2BCQ6DN03 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
HIST2H2BCQ6DN03 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
HIST2H2BCQ6DN03 PDHB-201ENST00000302746 1527 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
HIST2H2BCQ6DN03 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
HIST2H2BCQ6DN03 PPM1L-201ENST00000295839 1449 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
HIST2H2BCQ6DN03 TMEM9B-202ENST00000525069 1433 ntTSL 2 BASIC12.49□□□□□ -0.41
HIST2H2BCQ6DN03 FKBP4P8-201ENST00000610931 1369 ntBASIC12.49□□□□□ -0.41
HIST2H2BCQ6DN03 AHCYP4-201ENST00000419201 1315 ntBASIC12.49□□□□□ -0.41
HIST2H2BCQ6DN03 TMEM60-201ENST00000257663 1023 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
HIST2H2BCQ6DN03 COX14-201ENST00000317943 708 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
HIST2H2BCQ6DN03 IZUMO1R-201ENST00000328458 798 ntAPPRIS P2 TSL 5 BASIC12.49□□□□□ -0.41
HIST2H2BCQ6DN03 CLCC1-202ENST00000348264 1124 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
HIST2H2BCQ6DN03 LEMD1-205ENST00000367154 786 ntTSL 2 BASIC12.49□□□□□ -0.41
HIST2H2BCQ6DN03 SAT1-201ENST00000379251 801 ntTSL 2 BASIC12.49□□□□□ -0.41
HIST2H2BCQ6DN03 SAT1-202ENST00000379253 909 ntTSL 2 BASIC12.49□□□□□ -0.41
HIST2H2BCQ6DN03 SAT1-203ENST00000379254 868 ntTSL 3 BASIC12.49□□□□□ -0.41
HIST2H2BCQ6DN03 SAT1-204ENST00000379270 1065 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
HIST2H2BCQ6DN03 AP000354.1-201ENST00000396982 456 ntBASIC12.49□□□□□ -0.41
HIST2H2BCQ6DN03 Metazoa_SRP.9-201ENST00000415635 283 ntBASIC12.49□□□□□ -0.41
HIST2H2BCQ6DN03 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC12.49□□□□□ -0.41
HIST2H2BCQ6DN03 LRRC3-AS1-201ENST00000426578 784 ntTSL 3 BASIC12.49□□□□□ -0.41
HIST2H2BCQ6DN03 AL391415.1-201ENST00000439844 400 ntTSL 3 BASIC12.49□□□□□ -0.41
HIST2H2BCQ6DN03 GSS-202ENST00000451957 1092 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
HIST2H2BCQ6DN03 CSAG1-204ENST00000452779 627 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
HIST2H2BCQ6DN03 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
HIST2H2BCQ6DN03 AL928742.1-201ENST00000497397 548 ntTSL 4 BASIC12.49□□□□□ -0.41
HIST2H2BCQ6DN03 BCRP4-201ENST00000506079 804 ntBASIC12.49□□□□□ -0.41
HIST2H2BCQ6DN03 ALG3P1-201ENST00000508806 1114 ntBASIC12.49□□□□□ -0.41
HIST2H2BCQ6DN03 TMEM14C-205ENST00000541412 1177 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
HIST2H2BCQ6DN03 SNRPF-205ENST00000553192 552 ntTSL 4 BASIC12.49□□□□□ -0.41
HIST2H2BCQ6DN03 AP001094.3-201ENST00000580491 616 ntTSL 2 BASIC12.49□□□□□ -0.41
HIST2H2BCQ6DN03 AP006248.1-201ENST00000610471 67 ntBASIC12.49□□□□□ -0.41
HIST2H2BCQ6DN03 PDCD6-213ENST00000618970 931 ntTSL 3 BASIC12.49□□□□□ -0.41
HIST2H2BCQ6DN03 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC12.49□□□□□ -0.41
HIST2H2BCQ6DN03 AL662844.4-201ENST00000606367 2838 ntBASIC12.49□□□□□ -0.41
HIST2H2BCQ6DN03 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
HIST2H2BCQ6DN03 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
HIST2H2BCQ6DN03 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
HIST2H2BCQ6DN03 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC12.49□□□□□ -0.41
HIST2H2BCQ6DN03 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC12.49□□□□□ -0.41
HIST2H2BCQ6DN03 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
HIST2H2BCQ6DN03 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC12.49□□□□□ -0.41
HIST2H2BCQ6DN03 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC12.49□□□□□ -0.41
HIST2H2BCQ6DN03 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC12.49□□□□□ -0.41
HIST2H2BCQ6DN03 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC12.49□□□□□ -0.41
HIST2H2BCQ6DN03 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
HIST2H2BCQ6DN03 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
HIST2H2BCQ6DN03 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
HIST2H2BCQ6DN03 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC12.49□□□□□ -0.41
HIST2H2BCQ6DN03 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
HIST2H2BCQ6DN03 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
HIST2H2BCQ6DN03 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
HIST2H2BCQ6DN03 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
HIST2H2BCQ6DN03 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
HIST2H2BCQ6DN03 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
HIST2H2BCQ6DN03 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC12.48□□□□□ -0.41
HIST2H2BCQ6DN03 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
HIST2H2BCQ6DN03 KDF1-202ENST00000616918 1651 ntTSL 2 BASIC12.48□□□□□ -0.41
HIST2H2BCQ6DN03 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
HIST2H2BCQ6DN03 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
HIST2H2BCQ6DN03 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC12.48□□□□□ -0.41
HIST2H2BCQ6DN03 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
HIST2H2BCQ6DN03 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
HIST2H2BCQ6DN03 AL050341.2-201ENST00000567508 1541 ntBASIC12.48□□□□□ -0.41
HIST2H2BCQ6DN03 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
HIST2H2BCQ6DN03 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
HIST2H2BCQ6DN03 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
HIST2H2BCQ6DN03 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC12.48□□□□□ -0.41
HIST2H2BCQ6DN03 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
HIST2H2BCQ6DN03 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
HIST2H2BCQ6DN03 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
HIST2H2BCQ6DN03 ARL1-202ENST00000536227 1322 ntTSL 2 BASIC12.48□□□□□ -0.41
HIST2H2BCQ6DN03 OR2V1-201ENST00000329365 948 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
HIST2H2BCQ6DN03 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
HIST2H2BCQ6DN03 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
HIST2H2BCQ6DN03 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC12.48□□□□□ -0.41
HIST2H2BCQ6DN03 AL035414.1-201ENST00000451327 857 ntBASIC12.48□□□□□ -0.41
HIST2H2BCQ6DN03 CDK4P1-201ENST00000454213 828 ntBASIC12.48□□□□□ -0.41
HIST2H2BCQ6DN03 AL355376.1-201ENST00000456082 517 ntTSL 3 BASIC12.48□□□□□ -0.41
HIST2H2BCQ6DN03 ALG1L15P-201ENST00000482834 794 ntBASIC12.48□□□□□ -0.41
HIST2H2BCQ6DN03 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC12.48□□□□□ -0.41
HIST2H2BCQ6DN03 MIR2278-201ENST00000516344 96 ntBASIC12.48□□□□□ -0.41
HIST2H2BCQ6DN03 AP003351.1-201ENST00000522743 668 ntTSL 3 BASIC12.48□□□□□ -0.41
HIST2H2BCQ6DN03 TMEM123-208ENST00000532161 743 ntAPPRIS ALT2 TSL 3 BASIC12.48□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms