Protein–RNA interactions for Protein: Q494W8

CHRFAM7A, CHRNA7-FAM7A fusion protein, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7AQ494W8 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
CHRFAM7AQ494W8 WNT11-204ENST00000621122 789 ntTSL 5 BASIC13.14□□□□□ -0.31
CHRFAM7AQ494W8 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC13.14□□□□□ -0.31
CHRFAM7AQ494W8 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CHRFAM7AQ494W8 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC13.14□□□□□ -0.31
CHRFAM7AQ494W8 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CHRFAM7AQ494W8 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
CHRFAM7AQ494W8 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CHRFAM7AQ494W8 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
CHRFAM7AQ494W8 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC13.14□□□□□ -0.31
CHRFAM7AQ494W8 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
CHRFAM7AQ494W8 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC13.14□□□□□ -0.31
CHRFAM7AQ494W8 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
CHRFAM7AQ494W8 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
CHRFAM7AQ494W8 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC13.14□□□□□ -0.31
CHRFAM7AQ494W8 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CHRFAM7AQ494W8 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CHRFAM7AQ494W8 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CHRFAM7AQ494W8 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
CHRFAM7AQ494W8 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CHRFAM7AQ494W8 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC13.13□□□□□ -0.31
CHRFAM7AQ494W8 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
CHRFAM7AQ494W8 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CHRFAM7AQ494W8 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC13.13□□□□□ -0.31
CHRFAM7AQ494W8 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC13.13□□□□□ -0.31
CHRFAM7AQ494W8 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC13.13□□□□□ -0.31
CHRFAM7AQ494W8 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
CHRFAM7AQ494W8 CCDC88A-204ENST00000413716 9586 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CHRFAM7AQ494W8 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CHRFAM7AQ494W8 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CHRFAM7AQ494W8 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CHRFAM7AQ494W8 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC13.13□□□□□ -0.31
CHRFAM7AQ494W8 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CHRFAM7AQ494W8 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
CHRFAM7AQ494W8 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CHRFAM7AQ494W8 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC13.13□□□□□ -0.31
CHRFAM7AQ494W8 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CHRFAM7AQ494W8 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
CHRFAM7AQ494W8 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CHRFAM7AQ494W8 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CHRFAM7AQ494W8 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CHRFAM7AQ494W8 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CHRFAM7AQ494W8 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
CHRFAM7AQ494W8 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CHRFAM7AQ494W8 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC13.13□□□□□ -0.31
CHRFAM7AQ494W8 EEF1DP4-201ENST00000446006 880 ntBASIC13.13□□□□□ -0.31
CHRFAM7AQ494W8 FO681548.1-201ENST00000455617 1132 ntBASIC13.13□□□□□ -0.31
CHRFAM7AQ494W8 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC13.13□□□□□ -0.31
CHRFAM7AQ494W8 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC13.13□□□□□ -0.31
CHRFAM7AQ494W8 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC13.13□□□□□ -0.31
CHRFAM7AQ494W8 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
CHRFAM7AQ494W8 HNRNPUP1-201ENST00000554987 333 ntBASIC13.13□□□□□ -0.31
CHRFAM7AQ494W8 IGHV3OR16-16-201ENST00000563644 343 ntBASIC13.13□□□□□ -0.31
CHRFAM7AQ494W8 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC13.13□□□□□ -0.31
CHRFAM7AQ494W8 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC13.13□□□□□ -0.31
CHRFAM7AQ494W8 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC13.13□□□□□ -0.31
CHRFAM7AQ494W8 AC133539.2-201ENST00000604757 467 ntBASIC13.13□□□□□ -0.31
CHRFAM7AQ494W8 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC13.13□□□□□ -0.31
CHRFAM7AQ494W8 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC13.13□□□□□ -0.31
CHRFAM7AQ494W8 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CHRFAM7AQ494W8 CICP11-201ENST00000434745 2827 ntBASIC13.13□□□□□ -0.31
CHRFAM7AQ494W8 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
CHRFAM7AQ494W8 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CHRFAM7AQ494W8 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CHRFAM7AQ494W8 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CHRFAM7AQ494W8 ABR-228ENST00000574437 3196 ntTSL 5 BASIC13.13□□□□□ -0.31
CHRFAM7AQ494W8 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
CHRFAM7AQ494W8 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CHRFAM7AQ494W8 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CHRFAM7AQ494W8 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CHRFAM7AQ494W8 AC093525.8-201ENST00000624099 1342 ntBASIC13.13□□□□□ -0.31
CHRFAM7AQ494W8 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CHRFAM7AQ494W8 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CHRFAM7AQ494W8 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CHRFAM7AQ494W8 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC13.12□□□□□ -0.31
CHRFAM7AQ494W8 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CHRFAM7AQ494W8 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CHRFAM7AQ494W8 ACE3P-201ENST00000423435 1973 ntBASIC13.12□□□□□ -0.31
CHRFAM7AQ494W8 THBS2-201ENST00000366787 5811 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CHRFAM7AQ494W8 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CHRFAM7AQ494W8 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC13.12□□□□□ -0.31
CHRFAM7AQ494W8 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
CHRFAM7AQ494W8 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CHRFAM7AQ494W8 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
CHRFAM7AQ494W8 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC13.12□□□□□ -0.31
CHRFAM7AQ494W8 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CHRFAM7AQ494W8 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CHRFAM7AQ494W8 EMC10-201ENST00000334976 9446 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
CHRFAM7AQ494W8 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CHRFAM7AQ494W8 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CHRFAM7AQ494W8 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CHRFAM7AQ494W8 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
CHRFAM7AQ494W8 ABCA2-203ENST00000371605 8151 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
CHRFAM7AQ494W8 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CHRFAM7AQ494W8 FAM213A-205ENST00000606162 5859 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CHRFAM7AQ494W8 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
CHRFAM7AQ494W8 MYO16-203ENST00000357550 6779 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
CHRFAM7AQ494W8 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
CHRFAM7AQ494W8 CICP4-201ENST00000447359 2812 ntBASIC13.12□□□□□ -0.31
CHRFAM7AQ494W8 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms