Protein–RNA interactions for Protein: P43681

CHRNA4, Neuronal acetylcholine receptor subunit alpha-4, humanhuman

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4P43681 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC14.99□□□□□ -0.01
CHRNA4P43681 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CHRNA4P43681 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CHRNA4P43681 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC14.99□□□□□ -0.01
CHRNA4P43681 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
CHRNA4P43681 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC14.99□□□□□ -0.01
CHRNA4P43681 AC079776.1-201ENST00000401540 1152 ntBASIC14.99□□□□□ -0.01
CHRNA4P43681 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CHRNA4P43681 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CHRNA4P43681 FAM8A4P-201ENST00000435433 1213 ntBASIC14.99□□□□□ -0.01
CHRNA4P43681 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC14.99□□□□□ -0.01
CHRNA4P43681 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC14.99□□□□□ -0.01
CHRNA4P43681 TPT1P11-201ENST00000458482 498 ntBASIC14.99□□□□□ -0.01
CHRNA4P43681 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC14.99□□□□□ -0.01
CHRNA4P43681 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
CHRNA4P43681 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC14.99□□□□□ -0.01
CHRNA4P43681 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC14.99□□□□□ -0.01
CHRNA4P43681 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC14.99□□□□□ -0.01
CHRNA4P43681 KRT17P8-201ENST00000540749 863 ntBASIC14.99□□□□□ -0.01
CHRNA4P43681 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC14.99□□□□□ -0.01
CHRNA4P43681 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CHRNA4P43681 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC14.99□□□□□ -0.01
CHRNA4P43681 RPL28-206ENST00000558752 671 ntTSL 3 BASIC14.99□□□□□ -0.01
CHRNA4P43681 APRT-204ENST00000563655 709 ntTSL 5 BASIC14.99□□□□□ -0.01
CHRNA4P43681 MIR4683-201ENST00000579659 81 ntBASIC14.99□□□□□ -0.01
CHRNA4P43681 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC14.99□□□□□ -0.01
CHRNA4P43681 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
CHRNA4P43681 AC006453.4-201ENST00000636949 1252 ntBASIC14.99□□□□□ -0.01
CHRNA4P43681 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
CHRNA4P43681 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC14.99□□□□□ -0.01
CHRNA4P43681 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
CHRNA4P43681 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC14.99□□□□□ -0.01
CHRNA4P43681 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC14.99□□□□□ -0.01
CHRNA4P43681 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CHRNA4P43681 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CHRNA4P43681 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CHRNA4P43681 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CHRNA4P43681 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
CHRNA4P43681 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CHRNA4P43681 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC14.99□□□□□ -0.01
CHRNA4P43681 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
CHRNA4P43681 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC14.99□□□□□ -0.01
CHRNA4P43681 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CHRNA4P43681 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC14.99□□□□□ -0.01
CHRNA4P43681 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CHRNA4P43681 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
CHRNA4P43681 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CHRNA4P43681 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CHRNA4P43681 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CHRNA4P43681 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
CHRNA4P43681 AC006504.5-208ENST00000588784 2401 ntBASIC14.98□□□□□ -0.01
CHRNA4P43681 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
CHRNA4P43681 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC14.98□□□□□ -0.01
CHRNA4P43681 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
CHRNA4P43681 ABR-228ENST00000574437 3196 ntTSL 5 BASIC14.98□□□□□ -0.01
CHRNA4P43681 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CHRNA4P43681 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC14.98□□□□□ -0.01
CHRNA4P43681 AL354989.2-201ENST00000435838 1540 ntBASIC14.98□□□□□ -0.01
CHRNA4P43681 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC14.98□□□□□ -0.01
CHRNA4P43681 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CHRNA4P43681 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC14.98□□□□□ -0.01
CHRNA4P43681 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CHRNA4P43681 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
CHRNA4P43681 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
CHRNA4P43681 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CHRNA4P43681 ANKRD19P-201ENST00000338192 862 ntBASIC14.98□□□□□ -0.01
CHRNA4P43681 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC14.98□□□□□ -0.01
CHRNA4P43681 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
CHRNA4P43681 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CHRNA4P43681 MIR1202-201ENST00000408529 83 ntBASIC14.98□□□□□ -0.01
CHRNA4P43681 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
CHRNA4P43681 ARSEP1-201ENST00000420443 635 ntBASIC14.98□□□□□ -0.01
CHRNA4P43681 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CHRNA4P43681 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC14.98□□□□□ -0.01
CHRNA4P43681 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC14.98□□□□□ -0.01
CHRNA4P43681 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
CHRNA4P43681 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC14.98□□□□□ -0.01
CHRNA4P43681 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CHRNA4P43681 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CHRNA4P43681 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC14.98□□□□□ -0.01
CHRNA4P43681 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC14.98□□□□□ -0.01
CHRNA4P43681 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC14.98□□□□□ -0.01
CHRNA4P43681 SNX29P1-201ENST00000548357 1007 ntBASIC14.98□□□□□ -0.01
CHRNA4P43681 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC14.98□□□□□ -0.01
CHRNA4P43681 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC14.98□□□□□ -0.01
CHRNA4P43681 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC14.98□□□□□ -0.01
CHRNA4P43681 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC14.98□□□□□ -0.01
CHRNA4P43681 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC14.98□□□□□ -0.01
CHRNA4P43681 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC14.98□□□□□ -0.01
CHRNA4P43681 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
CHRNA4P43681 AC073413.1-201ENST00000603927 732 ntBASIC14.98□□□□□ -0.01
CHRNA4P43681 AL512343.1-201ENST00000605837 169 ntBASIC14.98□□□□□ -0.01
CHRNA4P43681 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC14.98□□□□□ -0.01
CHRNA4P43681 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CHRNA4P43681 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC14.98□□□□□ -0.01
CHRNA4P43681 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
CHRNA4P43681 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC14.98□□□□□ -0.01
CHRNA4P43681 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CHRNA4P43681 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC14.98□□□□□ -0.01
CHRNA4P43681 ANKRD30BP2-201ENST00000435744 1610 ntBASIC14.98□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms