Protein–RNA interactions for Protein: P14651

HOXB3, Homeobox protein Hox-B3, humanhuman

Predicted RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3P14651 AL157702.2-201ENST00000428292 1223 ntTSL 3 BASIC14.79□□□□□ -0.04
HOXB3P14651 AHCYP2-201ENST00000430630 1300 ntBASIC14.79□□□□□ -0.04
HOXB3P14651 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC14.79□□□□□ -0.04
HOXB3P14651 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
HOXB3P14651 AC114812.1-204ENST00000449669 728 ntBASIC14.79□□□□□ -0.04
HOXB3P14651 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC14.79□□□□□ -0.04
HOXB3P14651 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
HOXB3P14651 RORA-AS1-201ENST00000501579 761 ntTSL 5 BASIC14.79□□□□□ -0.04
HOXB3P14651 LINC02434-201ENST00000502419 677 ntTSL 3 BASIC14.79□□□□□ -0.04
HOXB3P14651 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
HOXB3P14651 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
HOXB3P14651 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
HOXB3P14651 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC14.79□□□□□ -0.04
HOXB3P14651 VBP1-203ENST00000535916 944 ntTSL 2 BASIC14.79□□□□□ -0.04
HOXB3P14651 FOS-202ENST00000535987 1402 ntTSL 2 BASIC14.79□□□□□ -0.04
HOXB3P14651 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
HOXB3P14651 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC14.79□□□□□ -0.04
HOXB3P14651 AL139021.1-201ENST00000556734 436 ntTSL 3 BASIC14.79□□□□□ -0.04
HOXB3P14651 AC090527.1-201ENST00000557965 431 ntTSL 3 BASIC14.79□□□□□ -0.04
HOXB3P14651 HNRNPA1P48-202ENST00000565308 961 ntBASIC14.79□□□□□ -0.04
HOXB3P14651 MIR4741-201ENST00000579822 90 ntBASIC14.79□□□□□ -0.04
HOXB3P14651 AC005412.1-201ENST00000580812 1049 ntBASIC14.79□□□□□ -0.04
HOXB3P14651 BNIP3P40-201ENST00000596017 556 ntBASIC14.79□□□□□ -0.04
HOXB3P14651 AC136475.1-202ENST00000602429 1151 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
HOXB3P14651 AC016747.2-203ENST00000606876 289 ntTSL 3 BASIC14.79□□□□□ -0.04
HOXB3P14651 AC016542.1-201ENST00000608259 493 ntBASIC14.79□□□□□ -0.04
HOXB3P14651 AL356417.2-202ENST00000608986 532 ntTSL 3 BASIC14.79□□□□□ -0.04
HOXB3P14651 ETV2-208ENST00000621247 941 ntTSL 5 BASIC14.79□□□□□ -0.04
HOXB3P14651 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC14.79□□□□□ -0.04
HOXB3P14651 AC233280.19-201ENST00000633223 136 ntBASIC14.79□□□□□ -0.04
HOXB3P14651 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC14.79□□□□□ -0.04
HOXB3P14651 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
HOXB3P14651 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC14.79□□□□□ -0.04
HOXB3P14651 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
HOXB3P14651 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
HOXB3P14651 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
HOXB3P14651 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC14.79□□□□□ -0.04
HOXB3P14651 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
HOXB3P14651 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
HOXB3P14651 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
HOXB3P14651 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HOXB3P14651 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC14.78□□□□□ -0.04
HOXB3P14651 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HOXB3P14651 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
HOXB3P14651 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HOXB3P14651 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
HOXB3P14651 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
HOXB3P14651 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HOXB3P14651 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
HOXB3P14651 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HOXB3P14651 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HOXB3P14651 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
HOXB3P14651 PRG2-201ENST00000311862 1424 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
HOXB3P14651 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC14.78□□□□□ -0.04
HOXB3P14651 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HOXB3P14651 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
HOXB3P14651 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
HOXB3P14651 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC14.78□□□□□ -0.04
HOXB3P14651 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HOXB3P14651 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HOXB3P14651 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC14.78□□□□□ -0.04
HOXB3P14651 CSH2-202ENST00000345366 598 ntTSL 5 BASIC14.78□□□□□ -0.04
HOXB3P14651 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HOXB3P14651 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC14.78□□□□□ -0.04
HOXB3P14651 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HOXB3P14651 MIR1202-201ENST00000408529 83 ntBASIC14.78□□□□□ -0.04
HOXB3P14651 AL513285.1-201ENST00000423187 432 ntTSL 3 BASIC14.78□□□□□ -0.04
HOXB3P14651 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
HOXB3P14651 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
HOXB3P14651 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC14.78□□□□□ -0.04
HOXB3P14651 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC14.78□□□□□ -0.04
HOXB3P14651 AC069277.2-201ENST00000454211 432 ntBASIC14.78□□□□□ -0.04
HOXB3P14651 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC14.78□□□□□ -0.04
HOXB3P14651 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC14.78□□□□□ -0.04
HOXB3P14651 AC105389.3-201ENST00000508038 907 ntTSL 5 BASIC14.78□□□□□ -0.04
HOXB3P14651 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC14.78□□□□□ -0.04
HOXB3P14651 RNA5SP486-201ENST00000515961 83 ntBASIC14.78□□□□□ -0.04
HOXB3P14651 LY6E-208ENST00000520531 490 ntTSL 2 BASIC14.78□□□□□ -0.04
HOXB3P14651 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
HOXB3P14651 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC14.78□□□□□ -0.04
HOXB3P14651 RN7SL819P-201ENST00000581896 270 ntBASIC14.78□□□□□ -0.04
HOXB3P14651 AL139022.2-201ENST00000606934 443 ntBASIC14.78□□□□□ -0.04
HOXB3P14651 AC073352.2-201ENST00000609385 439 ntBASIC14.78□□□□□ -0.04
HOXB3P14651 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC14.78□□□□□ -0.04
HOXB3P14651 ZEB1-AS1-208ENST00000607166 2503 ntBASIC14.78□□□□□ -0.04
HOXB3P14651 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HOXB3P14651 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HOXB3P14651 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC14.78□□□□□ -0.04
HOXB3P14651 AC126177.1-201ENST00000547829 2218 ntBASIC14.78□□□□□ -0.04
HOXB3P14651 AL109954.1-202ENST00000564051 2148 ntBASIC14.78□□□□□ -0.04
HOXB3P14651 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HOXB3P14651 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
HOXB3P14651 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
HOXB3P14651 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
HOXB3P14651 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
HOXB3P14651 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
HOXB3P14651 AC018735.1-201ENST00000437208 1502 ntBASIC14.77□□□□□ -0.04
HOXB3P14651 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.04
HOXB3P14651 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.04
HOXB3P14651 SLC9A7P1-202ENST00000556476 2239 ntBASIC14.77□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 63.9 ms