Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRIM3O75382 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRIM3O75382 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRIM3O75382 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRIM3O75382 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRIM3O75382 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRIM3O75382 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
TRIM3O75382 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC13.96□□□□□ -0.17
TRIM3O75382 B9D1-203ENST00000395615 805 ntTSL 3 BASIC13.96□□□□□ -0.17
TRIM3O75382 ACTBP8-201ENST00000403258 1108 ntBASIC13.96□□□□□ -0.17
TRIM3O75382 GHSR-202ENST00000427970 912 ntBASIC13.96□□□□□ -0.17
TRIM3O75382 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
TRIM3O75382 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
TRIM3O75382 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
TRIM3O75382 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC13.96□□□□□ -0.17
TRIM3O75382 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
TRIM3O75382 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC13.96□□□□□ -0.17
TRIM3O75382 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC13.96□□□□□ -0.17
TRIM3O75382 SNX29P1-201ENST00000548357 1007 ntBASIC13.96□□□□□ -0.17
TRIM3O75382 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC13.96□□□□□ -0.17
TRIM3O75382 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC13.96□□□□□ -0.17
TRIM3O75382 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC13.96□□□□□ -0.17
TRIM3O75382 AL008721.1-201ENST00000609964 604 ntBASIC13.96□□□□□ -0.17
TRIM3O75382 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC13.96□□□□□ -0.17
TRIM3O75382 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC13.96□□□□□ -0.17
TRIM3O75382 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRIM3O75382 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC13.96□□□□□ -0.17
TRIM3O75382 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
TRIM3O75382 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
TRIM3O75382 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
TRIM3O75382 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC13.96□□□□□ -0.18
TRIM3O75382 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
TRIM3O75382 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC13.96□□□□□ -0.18
TRIM3O75382 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC13.96□□□□□ -0.18
TRIM3O75382 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC13.96□□□□□ -0.18
TRIM3O75382 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.18
TRIM3O75382 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
TRIM3O75382 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC13.96□□□□□ -0.18
TRIM3O75382 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.18
TRIM3O75382 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC13.95□□□□□ -0.18
TRIM3O75382 PDIA3P1-201ENST00000471856 1510 ntBASIC13.95□□□□□ -0.18
TRIM3O75382 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
TRIM3O75382 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC13.95□□□□□ -0.18
TRIM3O75382 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC13.95□□□□□ -0.18
TRIM3O75382 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRIM3O75382 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC13.95□□□□□ -0.18
TRIM3O75382 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
TRIM3O75382 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
TRIM3O75382 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC13.95□□□□□ -0.18
TRIM3O75382 ZBTB45P1-201ENST00000452761 1456 ntBASIC13.95□□□□□ -0.18
TRIM3O75382 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRIM3O75382 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
TRIM3O75382 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC13.95□□□□□ -0.18
TRIM3O75382 AJ011931.1-201ENST00000618749 2492 ntBASIC13.95□□□□□ -0.18
TRIM3O75382 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRIM3O75382 ANKRD19P-201ENST00000338192 862 ntBASIC13.95□□□□□ -0.18
TRIM3O75382 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
TRIM3O75382 MIR658-201ENST00000385210 100 ntBASIC13.95□□□□□ -0.18
TRIM3O75382 AL139094.1-201ENST00000405549 1188 ntBASIC13.95□□□□□ -0.18
TRIM3O75382 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
TRIM3O75382 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRIM3O75382 AC016694.1-201ENST00000434179 700 ntBASIC13.95□□□□□ -0.18
TRIM3O75382 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC13.95□□□□□ -0.18
TRIM3O75382 AC007551.1-201ENST00000457394 519 ntBASIC13.95□□□□□ -0.18
TRIM3O75382 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC13.95□□□□□ -0.18
TRIM3O75382 FTH1P14-201ENST00000482930 551 ntBASIC13.95□□□□□ -0.18
TRIM3O75382 AC119751.2-201ENST00000504529 210 ntBASIC13.95□□□□□ -0.18
TRIM3O75382 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
TRIM3O75382 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC13.95□□□□□ -0.18
TRIM3O75382 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC13.95□□□□□ -0.18
TRIM3O75382 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC13.95□□□□□ -0.18
TRIM3O75382 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
TRIM3O75382 MIR6775-201ENST00000617557 69 ntBASIC13.95□□□□□ -0.18
TRIM3O75382 WNT11-204ENST00000621122 789 ntTSL 5 BASIC13.95□□□□□ -0.18
TRIM3O75382 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC13.95□□□□□ -0.18
TRIM3O75382 SRC-202ENST00000373558 4304 ntTSL 5 BASIC13.95□□□□□ -0.18
TRIM3O75382 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRIM3O75382 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
TRIM3O75382 CELP-203ENST00000624767 2414 ntTSL 5 BASIC13.95□□□□□ -0.18
TRIM3O75382 PPFIA4-202ENST00000295706 6395 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
TRIM3O75382 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRIM3O75382 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRIM3O75382 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
TRIM3O75382 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC13.95□□□□□ -0.18
TRIM3O75382 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
TRIM3O75382 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC13.95□□□□□ -0.18
TRIM3O75382 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC13.95□□□□□ -0.18
TRIM3O75382 TRIM56-201ENST00000306085 10952 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRIM3O75382 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRIM3O75382 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRIM3O75382 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRIM3O75382 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC13.94□□□□□ -0.18
TRIM3O75382 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRIM3O75382 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC13.94□□□□□ -0.18
TRIM3O75382 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
TRIM3O75382 NUDT3-201ENST00000607016 9905 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRIM3O75382 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
TRIM3O75382 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
TRIM3O75382 RPS15-201ENST00000233609 534 ntTSL 2 BASIC13.94□□□□□ -0.18
TRIM3O75382 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC13.94□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms