Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC14.37□□□□□ -0.11
CPNE3O75131 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CPNE3O75131 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CPNE3O75131 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC14.37□□□□□ -0.11
CPNE3O75131 GPAA1P2-201ENST00000417923 928 ntBASIC14.37□□□□□ -0.11
CPNE3O75131 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC14.37□□□□□ -0.11
CPNE3O75131 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC14.37□□□□□ -0.11
CPNE3O75131 AL591846.1-201ENST00000451736 433 ntBASIC14.37□□□□□ -0.11
CPNE3O75131 AC104306.2-201ENST00000451877 341 ntBASIC14.37□□□□□ -0.11
CPNE3O75131 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC14.37□□□□□ -0.11
CPNE3O75131 KRT8P13-201ENST00000463294 1010 ntBASIC14.37□□□□□ -0.11
CPNE3O75131 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC14.37□□□□□ -0.11
CPNE3O75131 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC14.37□□□□□ -0.11
CPNE3O75131 AP001258.2-201ENST00000529891 490 ntBASIC14.37□□□□□ -0.11
CPNE3O75131 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC14.37□□□□□ -0.11
CPNE3O75131 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC14.37□□□□□ -0.11
CPNE3O75131 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CPNE3O75131 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC14.37□□□□□ -0.11
CPNE3O75131 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
CPNE3O75131 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CPNE3O75131 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CPNE3O75131 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
CPNE3O75131 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
CPNE3O75131 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
CPNE3O75131 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CPNE3O75131 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CPNE3O75131 AC087481.3-201ENST00000602886 1894 ntBASIC14.37□□□□□ -0.11
CPNE3O75131 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CPNE3O75131 LINC00528-201ENST00000600723 2160 ntBASIC14.37□□□□□ -0.11
CPNE3O75131 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CPNE3O75131 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CPNE3O75131 GRN-222ENST00000639447 1314 ntTSL 2 BASIC14.37□□□□□ -0.11
CPNE3O75131 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CPNE3O75131 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CPNE3O75131 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CPNE3O75131 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC14.37□□□□□ -0.11
CPNE3O75131 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CPNE3O75131 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CPNE3O75131 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CPNE3O75131 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CPNE3O75131 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CPNE3O75131 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CPNE3O75131 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
CPNE3O75131 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CPNE3O75131 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CPNE3O75131 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
CPNE3O75131 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC14.36□□□□□ -0.11
CPNE3O75131 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CPNE3O75131 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CPNE3O75131 TMBIM7P-203ENST00000641617 1718 ntBASIC14.36□□□□□ -0.11
CPNE3O75131 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CPNE3O75131 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
CPNE3O75131 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CPNE3O75131 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CPNE3O75131 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CPNE3O75131 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CPNE3O75131 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
CPNE3O75131 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
CPNE3O75131 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
CPNE3O75131 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CPNE3O75131 NDUFAB1P1-201ENST00000404262 460 ntBASIC14.36□□□□□ -0.11
CPNE3O75131 POM121L8P-201ENST00000417732 1281 ntBASIC14.36□□□□□ -0.11
CPNE3O75131 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC14.36□□□□□ -0.11
CPNE3O75131 GHSR-202ENST00000427970 912 ntBASIC14.36□□□□□ -0.11
CPNE3O75131 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC14.36□□□□□ -0.11
CPNE3O75131 POM121L9P-203ENST00000441984 1285 ntBASIC14.36□□□□□ -0.11
CPNE3O75131 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC14.36□□□□□ -0.11
CPNE3O75131 RPSAP36-202ENST00000494591 1261 ntBASIC14.36□□□□□ -0.11
CPNE3O75131 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC14.36□□□□□ -0.11
CPNE3O75131 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC14.36□□□□□ -0.11
CPNE3O75131 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC14.36□□□□□ -0.11
CPNE3O75131 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC14.36□□□□□ -0.11
CPNE3O75131 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC14.36□□□□□ -0.11
CPNE3O75131 RN7SL713P-201ENST00000582127 302 ntBASIC14.36□□□□□ -0.11
CPNE3O75131 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC14.36□□□□□ -0.11
CPNE3O75131 OR10B1P-201ENST00000601666 907 ntBASIC14.36□□□□□ -0.11
CPNE3O75131 AL008638.5-201ENST00000623814 1298 ntBASIC14.36□□□□□ -0.11
CPNE3O75131 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC14.36□□□□□ -0.11
CPNE3O75131 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
CPNE3O75131 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CPNE3O75131 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CPNE3O75131 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC14.36□□□□□ -0.11
CPNE3O75131 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CPNE3O75131 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
CPNE3O75131 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CPNE3O75131 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CPNE3O75131 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
CPNE3O75131 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC14.36□□□□□ -0.11
CPNE3O75131 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CPNE3O75131 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
CPNE3O75131 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CPNE3O75131 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CPNE3O75131 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CPNE3O75131 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
CPNE3O75131 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CPNE3O75131 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CPNE3O75131 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CPNE3O75131 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CPNE3O75131 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC14.36□□□□□ -0.11
CPNE3O75131 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms