Protein–RNA interactions for Protein: Q9UBX1

CTSF, Cathepsin F, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSFQ9UBX1 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CTSFQ9UBX1 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC14.01□□□□□ -0.17
CTSFQ9UBX1 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
CTSFQ9UBX1 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
CTSFQ9UBX1 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CTSFQ9UBX1 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CTSFQ9UBX1 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CTSFQ9UBX1 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CTSFQ9UBX1 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC14.01□□□□□ -0.17
CTSFQ9UBX1 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CTSFQ9UBX1 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CTSFQ9UBX1 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CTSFQ9UBX1 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
CTSFQ9UBX1 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC14.01□□□□□ -0.17
CTSFQ9UBX1 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CTSFQ9UBX1 SMS-201ENST00000379404 1174 ntTSL 3 BASIC14.01□□□□□ -0.17
CTSFQ9UBX1 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
CTSFQ9UBX1 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CTSFQ9UBX1 AC021723.1-201ENST00000486306 515 ntBASIC14.01□□□□□ -0.17
CTSFQ9UBX1 AC091804.1-201ENST00000486888 567 ntBASIC14.01□□□□□ -0.17
CTSFQ9UBX1 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CTSFQ9UBX1 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC14.01□□□□□ -0.17
CTSFQ9UBX1 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
CTSFQ9UBX1 NAT9-222ENST00000583476 583 ntTSL 3 BASIC14.01□□□□□ -0.17
CTSFQ9UBX1 AL451050.2-201ENST00000606967 682 ntBASIC14.01□□□□□ -0.17
CTSFQ9UBX1 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
CTSFQ9UBX1 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CTSFQ9UBX1 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CTSFQ9UBX1 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CTSFQ9UBX1 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
CTSFQ9UBX1 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC14.01□□□□□ -0.17
CTSFQ9UBX1 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CTSFQ9UBX1 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC14.01□□□□□ -0.17
CTSFQ9UBX1 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC14.01□□□□□ -0.17
CTSFQ9UBX1 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
CTSFQ9UBX1 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
CTSFQ9UBX1 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CTSFQ9UBX1 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CTSFQ9UBX1 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC14.01□□□□□ -0.17
CTSFQ9UBX1 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CTSFQ9UBX1 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CTSFQ9UBX1 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC14.01□□□□□ -0.17
CTSFQ9UBX1 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
CTSFQ9UBX1 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC14□□□□□ -0.17
CTSFQ9UBX1 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC14□□□□□ -0.17
CTSFQ9UBX1 CICP23-201ENST00000605013 2741 ntBASIC14□□□□□ -0.17
CTSFQ9UBX1 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
CTSFQ9UBX1 AC023157.3-201ENST00000619086 2088 ntBASIC14□□□□□ -0.17
CTSFQ9UBX1 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CTSFQ9UBX1 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
CTSFQ9UBX1 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
CTSFQ9UBX1 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CTSFQ9UBX1 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
CTSFQ9UBX1 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC14□□□□□ -0.17
CTSFQ9UBX1 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CTSFQ9UBX1 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC14□□□□□ -0.17
CTSFQ9UBX1 GSN-215ENST00000545652 2428 ntTSL 2 BASIC14□□□□□ -0.17
CTSFQ9UBX1 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CTSFQ9UBX1 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CTSFQ9UBX1 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC14□□□□□ -0.17
CTSFQ9UBX1 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CTSFQ9UBX1 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CTSFQ9UBX1 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC14□□□□□ -0.17
CTSFQ9UBX1 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CTSFQ9UBX1 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
CTSFQ9UBX1 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
CTSFQ9UBX1 AC010141.1-201ENST00000411585 623 ntBASIC14□□□□□ -0.17
CTSFQ9UBX1 BCYRN1-201ENST00000418539 200 ntBASIC14□□□□□ -0.17
CTSFQ9UBX1 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC14□□□□□ -0.17
CTSFQ9UBX1 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC14□□□□□ -0.17
CTSFQ9UBX1 AC044849.1-201ENST00000519737 1188 ntBASIC14□□□□□ -0.17
CTSFQ9UBX1 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC14□□□□□ -0.17
CTSFQ9UBX1 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
CTSFQ9UBX1 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC14□□□□□ -0.17
CTSFQ9UBX1 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CTSFQ9UBX1 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC14□□□□□ -0.17
CTSFQ9UBX1 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC14□□□□□ -0.17
CTSFQ9UBX1 AC009955.4-201ENST00000597192 544 ntBASIC14□□□□□ -0.17
CTSFQ9UBX1 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC14□□□□□ -0.17
CTSFQ9UBX1 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC14□□□□□ -0.17
CTSFQ9UBX1 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CTSFQ9UBX1 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC14□□□□□ -0.17
CTSFQ9UBX1 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
CTSFQ9UBX1 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CTSFQ9UBX1 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
CTSFQ9UBX1 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
CTSFQ9UBX1 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
CTSFQ9UBX1 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
CTSFQ9UBX1 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CTSFQ9UBX1 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
CTSFQ9UBX1 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
CTSFQ9UBX1 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
CTSFQ9UBX1 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
CTSFQ9UBX1 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC14□□□□□ -0.17
CTSFQ9UBX1 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
CTSFQ9UBX1 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
CTSFQ9UBX1 TNRC18P2-201ENST00000417666 2714 ntBASIC13.99□□□□□ -0.17
CTSFQ9UBX1 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC13.99□□□□□ -0.17
CTSFQ9UBX1 AC013726.1-201ENST00000563747 2285 ntBASIC13.99□□□□□ -0.17
CTSFQ9UBX1 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms