Protein–RNA interactions for Protein: Q9P2X8

LINC00474, Putative uncharacterized protein encoded by LINC00474, humanhuman

Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00474Q9P2X8 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
LINC00474Q9P2X8 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC9.82□□□□□ -0.84
LINC00474Q9P2X8 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC9.82□□□□□ -0.84
LINC00474Q9P2X8 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC9.82□□□□□ -0.84
LINC00474Q9P2X8 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC9.82□□□□□ -0.84
LINC00474Q9P2X8 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC9.82□□□□□ -0.84
LINC00474Q9P2X8 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
LINC00474Q9P2X8 GAPDHP40-201ENST00000505218 1006 ntBASIC9.82□□□□□ -0.84
LINC00474Q9P2X8 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
LINC00474Q9P2X8 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC9.82□□□□□ -0.84
LINC00474Q9P2X8 API5-211ENST00000534695 560 ntTSL 5 BASIC9.82□□□□□ -0.84
LINC00474Q9P2X8 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC9.82□□□□□ -0.84
LINC00474Q9P2X8 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC9.82□□□□□ -0.84
LINC00474Q9P2X8 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC9.82□□□□□ -0.84
LINC00474Q9P2X8 AC138761.1-201ENST00000584393 385 ntBASIC9.82□□□□□ -0.84
LINC00474Q9P2X8 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC9.82□□□□□ -0.84
LINC00474Q9P2X8 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC9.82□□□□□ -0.84
LINC00474Q9P2X8 AL662799.1-202ENST00000614205 422 ntBASIC9.82□□□□□ -0.84
LINC00474Q9P2X8 METTL26-214ENST00000614890 801 ntTSL 3 BASIC9.82□□□□□ -0.84
LINC00474Q9P2X8 AP005019.2-201ENST00000615104 511 ntBASIC9.82□□□□□ -0.84
LINC00474Q9P2X8 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC9.82□□□□□ -0.84
LINC00474Q9P2X8 MROH4P-201ENST00000431302 1578 ntBASIC9.82□□□□□ -0.84
LINC00474Q9P2X8 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
LINC00474Q9P2X8 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
LINC00474Q9P2X8 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC9.82□□□□□ -0.84
LINC00474Q9P2X8 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC9.82□□□□□ -0.84
LINC00474Q9P2X8 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC9.82□□□□□ -0.84
LINC00474Q9P2X8 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC9.82□□□□□ -0.84
LINC00474Q9P2X8 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC9.82□□□□□ -0.84
LINC00474Q9P2X8 LPO-201ENST00000262290 2979 ntAPPRIS P3 TSL 1 (best) BASIC9.82□□□□□ -0.84
LINC00474Q9P2X8 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
LINC00474Q9P2X8 ARHGAP10-201ENST00000336498 3299 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
LINC00474Q9P2X8 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
LINC00474Q9P2X8 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
LINC00474Q9P2X8 KIAA1217-209ENST00000430453 5962 ntAPPRIS ALT2 TSL 5 BASIC9.82□□□□□ -0.84
LINC00474Q9P2X8 KIAA1217-211ENST00000458595 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
LINC00474Q9P2X8 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC9.82□□□□□ -0.84
LINC00474Q9P2X8 Z83844.1-201ENST00000455236 4904 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
LINC00474Q9P2X8 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
LINC00474Q9P2X8 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
LINC00474Q9P2X8 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC9.82□□□□□ -0.84
LINC00474Q9P2X8 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC9.82□□□□□ -0.84
LINC00474Q9P2X8 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC9.82□□□□□ -0.84
LINC00474Q9P2X8 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC9.82□□□□□ -0.84
LINC00474Q9P2X8 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC9.82□□□□□ -0.84
LINC00474Q9P2X8 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
LINC00474Q9P2X8 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC9.82□□□□□ -0.84
LINC00474Q9P2X8 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
LINC00474Q9P2X8 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC9.82□□□□□ -0.84
LINC00474Q9P2X8 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC9.82□□□□□ -0.84
LINC00474Q9P2X8 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC9.82□□□□□ -0.84
LINC00474Q9P2X8 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC9.81□□□□□ -0.84
LINC00474Q9P2X8 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC9.81□□□□□ -0.84
LINC00474Q9P2X8 TCF4-248ENST00000616053 8140 ntTSL 5 BASIC9.81□□□□□ -0.84
LINC00474Q9P2X8 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
LINC00474Q9P2X8 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC9.81□□□□□ -0.84
LINC00474Q9P2X8 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
LINC00474Q9P2X8 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC9.81□□□□□ -0.84
LINC00474Q9P2X8 AC023157.3-201ENST00000619086 2088 ntBASIC9.81□□□□□ -0.84
LINC00474Q9P2X8 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
LINC00474Q9P2X8 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
LINC00474Q9P2X8 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
LINC00474Q9P2X8 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
LINC00474Q9P2X8 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC9.81□□□□□ -0.84
LINC00474Q9P2X8 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
LINC00474Q9P2X8 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC9.81□□□□□ -0.84
LINC00474Q9P2X8 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
LINC00474Q9P2X8 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC9.81□□□□□ -0.84
LINC00474Q9P2X8 AC011700.1-201ENST00000610409 2627 ntBASIC9.81□□□□□ -0.84
LINC00474Q9P2X8 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
LINC00474Q9P2X8 PLA2G4F-202ENST00000397272 5587 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
LINC00474Q9P2X8 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
LINC00474Q9P2X8 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC9.81□□□□□ -0.84
LINC00474Q9P2X8 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
LINC00474Q9P2X8 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
LINC00474Q9P2X8 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
LINC00474Q9P2X8 CHD5-201ENST00000262450 9646 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
LINC00474Q9P2X8 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
LINC00474Q9P2X8 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC9.81□□□□□ -0.84
LINC00474Q9P2X8 TCF23-201ENST00000296096 4882 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
LINC00474Q9P2X8 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
LINC00474Q9P2X8 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
LINC00474Q9P2X8 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
LINC00474Q9P2X8 PPFIA4-202ENST00000295706 6395 ntAPPRIS ALT2 TSL 5 BASIC9.81□□□□□ -0.84
LINC00474Q9P2X8 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC9.81□□□□□ -0.84
LINC00474Q9P2X8 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC9.81□□□□□ -0.84
LINC00474Q9P2X8 PGGT1BP2-201ENST00000398621 1028 ntBASIC9.81□□□□□ -0.84
LINC00474Q9P2X8 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
LINC00474Q9P2X8 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC9.81□□□□□ -0.84
LINC00474Q9P2X8 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC9.81□□□□□ -0.84
LINC00474Q9P2X8 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
LINC00474Q9P2X8 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
LINC00474Q9P2X8 RN7SL752P-201ENST00000463779 287 ntBASIC9.81□□□□□ -0.84
LINC00474Q9P2X8 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC9.81□□□□□ -0.84
LINC00474Q9P2X8 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC9.81□□□□□ -0.84
LINC00474Q9P2X8 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC9.81□□□□□ -0.84
LINC00474Q9P2X8 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
LINC00474Q9P2X8 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
LINC00474Q9P2X8 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC9.81□□□□□ -0.84
LINC00474Q9P2X8 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC9.81□□□□□ -0.84
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms