Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC15.82■□□□□ 0.12
CCDC50Q8IVM0 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC15.82■□□□□ 0.12
CCDC50Q8IVM0 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC15.82■□□□□ 0.12
CCDC50Q8IVM0 AL353779.1-201ENST00000434793 351 ntBASIC15.82■□□□□ 0.12
CCDC50Q8IVM0 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC15.82■□□□□ 0.12
CCDC50Q8IVM0 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC15.82■□□□□ 0.12
CCDC50Q8IVM0 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CCDC50Q8IVM0 AC093214.1-201ENST00000511688 1107 ntBASIC15.82■□□□□ 0.12
CCDC50Q8IVM0 DOC2GP-202ENST00000514950 1163 ntBASIC15.82■□□□□ 0.12
CCDC50Q8IVM0 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC15.82■□□□□ 0.12
CCDC50Q8IVM0 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC15.82■□□□□ 0.12
CCDC50Q8IVM0 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCDC50Q8IVM0 AC023310.3-201ENST00000557027 670 ntBASIC15.82■□□□□ 0.12
CCDC50Q8IVM0 AC100756.1-201ENST00000562736 682 ntBASIC15.82■□□□□ 0.12
CCDC50Q8IVM0 AC138749.3-201ENST00000567691 622 ntBASIC15.82■□□□□ 0.12
CCDC50Q8IVM0 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
CCDC50Q8IVM0 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC15.82■□□□□ 0.12
CCDC50Q8IVM0 AC116165.1-201ENST00000611806 668 ntBASIC15.82■□□□□ 0.12
CCDC50Q8IVM0 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC15.82■□□□□ 0.12
CCDC50Q8IVM0 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CCDC50Q8IVM0 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCDC50Q8IVM0 AC018665.1-201ENST00000622927 1362 ntBASIC15.82■□□□□ 0.12
CCDC50Q8IVM0 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCDC50Q8IVM0 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CCDC50Q8IVM0 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCDC50Q8IVM0 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC15.82■□□□□ 0.12
CCDC50Q8IVM0 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC15.82■□□□□ 0.12
CCDC50Q8IVM0 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC15.82■□□□□ 0.12
CCDC50Q8IVM0 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCDC50Q8IVM0 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCDC50Q8IVM0 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCDC50Q8IVM0 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
CCDC50Q8IVM0 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCDC50Q8IVM0 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCDC50Q8IVM0 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC15.82■□□□□ 0.12
CCDC50Q8IVM0 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCDC50Q8IVM0 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC15.81■□□□□ 0.12
CCDC50Q8IVM0 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC50Q8IVM0 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC50Q8IVM0 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC50Q8IVM0 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC50Q8IVM0 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
CCDC50Q8IVM0 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC50Q8IVM0 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC50Q8IVM0 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC50Q8IVM0 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC50Q8IVM0 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC50Q8IVM0 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC50Q8IVM0 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC50Q8IVM0 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC15.81■□□□□ 0.12
CCDC50Q8IVM0 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC15.81■□□□□ 0.12
CCDC50Q8IVM0 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC15.81■□□□□ 0.12
CCDC50Q8IVM0 HLA-K-203ENST00000430151 1046 ntBASIC15.81■□□□□ 0.12
CCDC50Q8IVM0 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC50Q8IVM0 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC15.81■□□□□ 0.12
CCDC50Q8IVM0 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC15.81■□□□□ 0.12
CCDC50Q8IVM0 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC15.81■□□□□ 0.12
CCDC50Q8IVM0 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC50Q8IVM0 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC50Q8IVM0 RN7SL399P-201ENST00000471648 279 ntBASIC15.81■□□□□ 0.12
CCDC50Q8IVM0 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC15.81■□□□□ 0.12
CCDC50Q8IVM0 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC15.81■□□□□ 0.12
CCDC50Q8IVM0 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC50Q8IVM0 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC50Q8IVM0 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
CCDC50Q8IVM0 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC50Q8IVM0 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC50Q8IVM0 RNA5-8SN1-201ENST00000610460 153 ntBASIC15.81■□□□□ 0.12
CCDC50Q8IVM0 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC15.81■□□□□ 0.12
CCDC50Q8IVM0 RNA5-8SN5-202ENST00000612463 153 ntBASIC15.81■□□□□ 0.12
CCDC50Q8IVM0 RNA5-8SN4-201ENST00000613359 153 ntBASIC15.81■□□□□ 0.12
CCDC50Q8IVM0 RNA5-8SN5-201ENST00000619471 153 ntBASIC15.81■□□□□ 0.12
CCDC50Q8IVM0 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC15.81■□□□□ 0.12
CCDC50Q8IVM0 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
CCDC50Q8IVM0 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC50Q8IVM0 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC50Q8IVM0 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC15.81■□□□□ 0.12
CCDC50Q8IVM0 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC50Q8IVM0 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC15.81■□□□□ 0.12
CCDC50Q8IVM0 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC50Q8IVM0 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC50Q8IVM0 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC50Q8IVM0 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC50Q8IVM0 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
CCDC50Q8IVM0 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC50Q8IVM0 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC15.81■□□□□ 0.12
CCDC50Q8IVM0 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC50Q8IVM0 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC50Q8IVM0 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
CCDC50Q8IVM0 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC15.8■□□□□ 0.12
CCDC50Q8IVM0 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC15.8■□□□□ 0.12
CCDC50Q8IVM0 AC023090.2-201ENST00000625182 2110 ntBASIC15.8■□□□□ 0.12
CCDC50Q8IVM0 TKT-201ENST00000296289 1931 ntTSL 5 BASIC15.8■□□□□ 0.12
CCDC50Q8IVM0 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC50Q8IVM0 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC50Q8IVM0 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
CCDC50Q8IVM0 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC15.8■□□□□ 0.12
CCDC50Q8IVM0 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC15.8■□□□□ 0.12
CCDC50Q8IVM0 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC50Q8IVM0 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 57.6 ms