Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 AC055876.3-201ENST00000431496 288 ntBASIC13.12□□□□□ -0.31
C11orf88Q6PI97 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC13.12□□□□□ -0.31
C11orf88Q6PI97 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC13.12□□□□□ -0.31
C11orf88Q6PI97 AC093214.1-201ENST00000511688 1107 ntBASIC13.12□□□□□ -0.31
C11orf88Q6PI97 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC13.12□□□□□ -0.31
C11orf88Q6PI97 AC026150.2-201ENST00000564693 1156 ntBASIC13.12□□□□□ -0.31
C11orf88Q6PI97 PAM16-215ENST00000577031 548 ntTSL 4 BASIC13.12□□□□□ -0.31
C11orf88Q6PI97 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC13.12□□□□□ -0.31
C11orf88Q6PI97 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
C11orf88Q6PI97 AC027307.2-201ENST00000591252 911 ntBASIC13.12□□□□□ -0.31
C11orf88Q6PI97 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC13.12□□□□□ -0.31
C11orf88Q6PI97 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC13.12□□□□□ -0.31
C11orf88Q6PI97 AC138649.4-201ENST00000612222 287 ntBASIC13.12□□□□□ -0.31
C11orf88Q6PI97 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC13.12□□□□□ -0.31
C11orf88Q6PI97 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC13.12□□□□□ -0.31
C11orf88Q6PI97 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC13.12□□□□□ -0.31
C11orf88Q6PI97 SGMS1-202ENST00000361781 3744 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
C11orf88Q6PI97 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
C11orf88Q6PI97 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
C11orf88Q6PI97 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC13.12□□□□□ -0.31
C11orf88Q6PI97 LDLRAD4-201ENST00000359446 8486 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
C11orf88Q6PI97 USP38-201ENST00000307017 7009 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
C11orf88Q6PI97 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
C11orf88Q6PI97 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
C11orf88Q6PI97 ACE3P-201ENST00000423435 1973 ntBASIC13.12□□□□□ -0.31
C11orf88Q6PI97 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
C11orf88Q6PI97 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC13.12□□□□□ -0.31
C11orf88Q6PI97 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC13.12□□□□□ -0.31
C11orf88Q6PI97 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
C11orf88Q6PI97 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
C11orf88Q6PI97 CACNA1G-218ENST00000507510 7014 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
C11orf88Q6PI97 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
C11orf88Q6PI97 USP2-201ENST00000260187 3732 ntAPPRIS P4 TSL 1 (best) BASIC13.12□□□□□ -0.31
C11orf88Q6PI97 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
C11orf88Q6PI97 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
C11orf88Q6PI97 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
C11orf88Q6PI97 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC13.11□□□□□ -0.31
C11orf88Q6PI97 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC13.11□□□□□ -0.31
C11orf88Q6PI97 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
C11orf88Q6PI97 NFKBIZ-202ENST00000326172 3923 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
C11orf88Q6PI97 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC13.11□□□□□ -0.31
C11orf88Q6PI97 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC13.11□□□□□ -0.31
C11orf88Q6PI97 DGCR9-201ENST00000609630 2415 ntBASIC13.11□□□□□ -0.31
C11orf88Q6PI97 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC13.11□□□□□ -0.31
C11orf88Q6PI97 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC13.11□□□□□ -0.31
C11orf88Q6PI97 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
C11orf88Q6PI97 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
C11orf88Q6PI97 ANKRD36-204ENST00000461153 6102 ntAPPRIS P2 TSL 5 BASIC13.11□□□□□ -0.31
C11orf88Q6PI97 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
C11orf88Q6PI97 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
C11orf88Q6PI97 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC13.11□□□□□ -0.31
C11orf88Q6PI97 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
C11orf88Q6PI97 FOXK1-201ENST00000328914 11181 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
C11orf88Q6PI97 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC13.11□□□□□ -0.31
C11orf88Q6PI97 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
C11orf88Q6PI97 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
C11orf88Q6PI97 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC13.11□□□□□ -0.31
C11orf88Q6PI97 MIR943-201ENST00000401286 94 ntBASIC13.11□□□□□ -0.31
C11orf88Q6PI97 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
C11orf88Q6PI97 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC13.11□□□□□ -0.31
C11orf88Q6PI97 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC13.11□□□□□ -0.31
C11orf88Q6PI97 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
C11orf88Q6PI97 PRYP6-201ENST00000514804 343 ntBASIC13.11□□□□□ -0.31
C11orf88Q6PI97 GATD1-206ENST00000526325 756 ntTSL 5 BASIC13.11□□□□□ -0.31
C11orf88Q6PI97 AC190387.1-201ENST00000551683 408 ntBASIC13.11□□□□□ -0.31
C11orf88Q6PI97 AP000842.3-202ENST00000569238 1080 ntBASIC13.11□□□□□ -0.31
C11orf88Q6PI97 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC13.11□□□□□ -0.31
C11orf88Q6PI97 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC13.11□□□□□ -0.31
C11orf88Q6PI97 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC13.11□□□□□ -0.31
C11orf88Q6PI97 AC005498.2-205ENST00000593218 784 ntBASIC13.11□□□□□ -0.31
C11orf88Q6PI97 AC073389.1-201ENST00000595595 795 ntBASIC13.11□□□□□ -0.31
C11orf88Q6PI97 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
C11orf88Q6PI97 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC13.11□□□□□ -0.31
C11orf88Q6PI97 GATAD2A-203ENST00000404158 5776 ntAPPRIS ALT1 TSL 2 BASIC13.11□□□□□ -0.31
C11orf88Q6PI97 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
C11orf88Q6PI97 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC13.11□□□□□ -0.31
C11orf88Q6PI97 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC13.11□□□□□ -0.31
C11orf88Q6PI97 HSPH1-202ENST00000380405 3480 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
C11orf88Q6PI97 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC13.11□□□□□ -0.31
C11orf88Q6PI97 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC13.11□□□□□ -0.31
C11orf88Q6PI97 FBN1-201ENST00000316623 11756 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
C11orf88Q6PI97 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
C11orf88Q6PI97 SFI1-229ENST00000540643 4226 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
C11orf88Q6PI97 C15orf39-207ENST00000567617 4249 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
C11orf88Q6PI97 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
C11orf88Q6PI97 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
C11orf88Q6PI97 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC13.11□□□□□ -0.31
C11orf88Q6PI97 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC13.11□□□□□ -0.31
C11orf88Q6PI97 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC13.11□□□□□ -0.31
C11orf88Q6PI97 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
C11orf88Q6PI97 POTEE-201ENST00000356920 4159 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
C11orf88Q6PI97 NDUFA10-201ENST00000252711 4915 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
C11orf88Q6PI97 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
C11orf88Q6PI97 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
C11orf88Q6PI97 AC011474.4-201ENST00000623523 2076 ntBASIC13.11□□□□□ -0.31
C11orf88Q6PI97 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
C11orf88Q6PI97 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
C11orf88Q6PI97 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
C11orf88Q6PI97 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC13.11□□□□□ -0.31
C11orf88Q6PI97 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms