Protein–RNA interactions for Protein: Q07654

TFF3, Trefoil factor 3, humanhuman

Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3Q07654 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TFF3Q07654 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC13.08□□□□□ -0.32
TFF3Q07654 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC13.08□□□□□ -0.32
TFF3Q07654 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC13.08□□□□□ -0.32
TFF3Q07654 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TFF3Q07654 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
TFF3Q07654 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC13.07□□□□□ -0.32
TFF3Q07654 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
TFF3Q07654 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
TFF3Q07654 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TFF3Q07654 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
TFF3Q07654 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
TFF3Q07654 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
TFF3Q07654 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TFF3Q07654 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
TFF3Q07654 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TFF3Q07654 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC13.07□□□□□ -0.32
TFF3Q07654 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TFF3Q07654 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC13.07□□□□□ -0.32
TFF3Q07654 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TFF3Q07654 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC13.07□□□□□ -0.32
TFF3Q07654 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
TFF3Q07654 RN7SKP230-201ENST00000365642 335 ntBASIC13.07□□□□□ -0.32
TFF3Q07654 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
TFF3Q07654 AC026316.1-201ENST00000398900 414 ntBASIC13.07□□□□□ -0.32
TFF3Q07654 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC13.07□□□□□ -0.32
TFF3Q07654 MCPH1-AS1-203ENST00000525186 869 ntTSL 3 BASIC13.07□□□□□ -0.32
TFF3Q07654 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC13.07□□□□□ -0.32
TFF3Q07654 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC13.07□□□□□ -0.32
TFF3Q07654 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC13.07□□□□□ -0.32
TFF3Q07654 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
TFF3Q07654 DYRK1B-208ENST00000601972 772 ntTSL 2 BASIC13.07□□□□□ -0.32
TFF3Q07654 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
TFF3Q07654 AC020910.5-201ENST00000623668 1865 ntBASIC13.07□□□□□ -0.32
TFF3Q07654 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TFF3Q07654 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TFF3Q07654 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
TFF3Q07654 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TFF3Q07654 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
TFF3Q07654 AC136621.1-201ENST00000624017 2304 ntBASIC13.07□□□□□ -0.32
TFF3Q07654 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
TFF3Q07654 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
TFF3Q07654 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
TFF3Q07654 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
TFF3Q07654 BNIP1-201ENST00000231668 1339 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
TFF3Q07654 DNASE1L2-204ENST00000567494 1301 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
TFF3Q07654 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC13.07□□□□□ -0.32
TFF3Q07654 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TFF3Q07654 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
TFF3Q07654 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TFF3Q07654 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
TFF3Q07654 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TFF3Q07654 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
TFF3Q07654 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC13.07□□□□□ -0.32
TFF3Q07654 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
TFF3Q07654 SLC9A7P1-202ENST00000556476 2239 ntBASIC13.07□□□□□ -0.32
TFF3Q07654 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TFF3Q07654 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
TFF3Q07654 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC13.06□□□□□ -0.32
TFF3Q07654 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC13.06□□□□□ -0.32
TFF3Q07654 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TFF3Q07654 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TFF3Q07654 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
TFF3Q07654 SSR4P1-203ENST00000599569 2260 ntBASIC13.06□□□□□ -0.32
TFF3Q07654 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TFF3Q07654 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC13.06□□□□□ -0.32
TFF3Q07654 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TFF3Q07654 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TFF3Q07654 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
TFF3Q07654 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TFF3Q07654 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TFF3Q07654 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
TFF3Q07654 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC13.06□□□□□ -0.32
TFF3Q07654 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
TFF3Q07654 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
TFF3Q07654 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TFF3Q07654 TMEM177-203ENST00000409951 1216 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
TFF3Q07654 MYO16-AS1-201ENST00000439299 580 ntTSL 5 BASIC13.06□□□□□ -0.32
TFF3Q07654 KLF2P1-201ENST00000447438 1042 ntBASIC13.06□□□□□ -0.32
TFF3Q07654 AC105389.3-201ENST00000508038 907 ntTSL 5 BASIC13.06□□□□□ -0.32
TFF3Q07654 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC13.06□□□□□ -0.32
TFF3Q07654 AC090857.1-201ENST00000527400 390 ntBASIC13.06□□□□□ -0.32
TFF3Q07654 SAP25-201ENST00000538735 837 ntAPPRIS P2 TSL 3 BASIC13.06□□□□□ -0.32
TFF3Q07654 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC13.06□□□□□ -0.32
TFF3Q07654 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TFF3Q07654 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC13.06□□□□□ -0.32
TFF3Q07654 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC13.06□□□□□ -0.32
TFF3Q07654 AC008825.2-201ENST00000603374 718 ntBASIC13.06□□□□□ -0.32
TFF3Q07654 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC13.06□□□□□ -0.32
TFF3Q07654 AC103691.2-201ENST00000618824 433 ntBASIC13.06□□□□□ -0.32
TFF3Q07654 NAP1L6-202ENST00000641404 1222 ntBASIC13.06□□□□□ -0.32
TFF3Q07654 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC13.06□□□□□ -0.32
TFF3Q07654 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
TFF3Q07654 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC13.06□□□□□ -0.32
TFF3Q07654 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC13.06□□□□□ -0.32
TFF3Q07654 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
TFF3Q07654 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TFF3Q07654 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
TFF3Q07654 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TFF3Q07654 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms