Protein–RNA interactions for Protein: Q00532

CDKL1, Cyclin-dependent kinase-like 1, humanhuman

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL1Q00532 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC14.7□□□□□ -0.06
CDKL1Q00532 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
CDKL1Q00532 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
CDKL1Q00532 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
CDKL1Q00532 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC14.7□□□□□ -0.06
CDKL1Q00532 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC14.7□□□□□ -0.06
CDKL1Q00532 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
CDKL1Q00532 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CDKL1Q00532 WASH4P-201ENST00000564273 1246 ntBASIC14.7□□□□□ -0.06
CDKL1Q00532 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
CDKL1Q00532 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC14.7□□□□□ -0.06
CDKL1Q00532 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC14.7□□□□□ -0.06
CDKL1Q00532 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CDKL1Q00532 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CDKL1Q00532 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
CDKL1Q00532 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CDKL1Q00532 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC14.7□□□□□ -0.06
CDKL1Q00532 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CDKL1Q00532 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC14.7□□□□□ -0.06
CDKL1Q00532 LRRC59-203ENST00000576448 1531 ntBASIC14.7□□□□□ -0.06
CDKL1Q00532 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CDKL1Q00532 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
CDKL1Q00532 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CDKL1Q00532 AC113367.3-201ENST00000508316 1912 ntBASIC14.7□□□□□ -0.06
CDKL1Q00532 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC14.7□□□□□ -0.06
CDKL1Q00532 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CDKL1Q00532 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC14.69□□□□□ -0.06
CDKL1Q00532 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CDKL1Q00532 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDKL1Q00532 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CDKL1Q00532 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC14.69□□□□□ -0.06
CDKL1Q00532 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
CDKL1Q00532 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDKL1Q00532 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
CDKL1Q00532 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDKL1Q00532 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC14.69□□□□□ -0.06
CDKL1Q00532 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDKL1Q00532 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDKL1Q00532 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDKL1Q00532 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDKL1Q00532 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDKL1Q00532 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC14.69□□□□□ -0.06
CDKL1Q00532 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDKL1Q00532 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDKL1Q00532 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDKL1Q00532 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC14.69□□□□□ -0.06
CDKL1Q00532 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
CDKL1Q00532 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC14.69□□□□□ -0.06
CDKL1Q00532 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDKL1Q00532 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDKL1Q00532 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDKL1Q00532 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC14.69□□□□□ -0.06
CDKL1Q00532 APOA1-205ENST00000375329 927 ntTSL 2 BASIC14.69□□□□□ -0.06
CDKL1Q00532 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC14.69□□□□□ -0.06
CDKL1Q00532 TLE1P1-201ENST00000422965 589 ntBASIC14.69□□□□□ -0.06
CDKL1Q00532 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC14.69□□□□□ -0.06
CDKL1Q00532 AC026434.2-201ENST00000506094 1078 ntBASIC14.69□□□□□ -0.06
CDKL1Q00532 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC14.69□□□□□ -0.06
CDKL1Q00532 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC14.69□□□□□ -0.06
CDKL1Q00532 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC14.69□□□□□ -0.06
CDKL1Q00532 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC14.69□□□□□ -0.06
CDKL1Q00532 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC14.69□□□□□ -0.06
CDKL1Q00532 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC14.69□□□□□ -0.06
CDKL1Q00532 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC14.69□□□□□ -0.06
CDKL1Q00532 ABBA01031660.1-201ENST00000635219 756 ntBASIC14.69□□□□□ -0.06
CDKL1Q00532 AL033527.5-201ENST00000641382 801 ntBASIC14.69□□□□□ -0.06
CDKL1Q00532 USE1-206ENST00000595101 1776 ntTSL 2 BASIC14.69□□□□□ -0.06
CDKL1Q00532 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
CDKL1Q00532 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC14.69□□□□□ -0.06
CDKL1Q00532 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDKL1Q00532 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
CDKL1Q00532 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDKL1Q00532 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CDKL1Q00532 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CDKL1Q00532 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDKL1Q00532 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC14.69□□□□□ -0.06
CDKL1Q00532 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CDKL1Q00532 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDKL1Q00532 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC14.69□□□□□ -0.06
CDKL1Q00532 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDKL1Q00532 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
CDKL1Q00532 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC14.69□□□□□ -0.06
CDKL1Q00532 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC14.69□□□□□ -0.06
CDKL1Q00532 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDKL1Q00532 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC14.69□□□□□ -0.06
CDKL1Q00532 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
CDKL1Q00532 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDKL1Q00532 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CDKL1Q00532 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CDKL1Q00532 KRT8P35-201ENST00000483942 1338 ntBASIC14.68□□□□□ -0.06
CDKL1Q00532 PCDHA3-202ENST00000532566 4594 ntBASIC14.68□□□□□ -0.06
CDKL1Q00532 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
CDKL1Q00532 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC14.68□□□□□ -0.06
CDKL1Q00532 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CDKL1Q00532 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CDKL1Q00532 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CDKL1Q00532 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CDKL1Q00532 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CDKL1Q00532 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
CDKL1Q00532 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms