Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 AL360270.3-201ENST00000609118 1348 ntBASIC13.71□□□□□ -0.21
CLDN20P56880 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CLDN20P56880 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
CLDN20P56880 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
CLDN20P56880 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CLDN20P56880 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC13.71□□□□□ -0.21
CLDN20P56880 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
CLDN20P56880 RPS15-201ENST00000233609 534 ntTSL 2 BASIC13.71□□□□□ -0.21
CLDN20P56880 ZBTB12BP-201ENST00000314232 1122 ntBASIC13.71□□□□□ -0.21
CLDN20P56880 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
CLDN20P56880 ANKRD19P-201ENST00000338192 862 ntBASIC13.71□□□□□ -0.21
CLDN20P56880 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
CLDN20P56880 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC13.71□□□□□ -0.21
CLDN20P56880 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
CLDN20P56880 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CLDN20P56880 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
CLDN20P56880 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC13.71□□□□□ -0.21
CLDN20P56880 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CLDN20P56880 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
CLDN20P56880 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC13.71□□□□□ -0.21
CLDN20P56880 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC13.71□□□□□ -0.21
CLDN20P56880 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC13.71□□□□□ -0.21
CLDN20P56880 RPS15-205ENST00000586686 562 ntTSL 5 BASIC13.71□□□□□ -0.21
CLDN20P56880 IFT20-216ENST00000588477 774 ntTSL 5 BASIC13.71□□□□□ -0.21
CLDN20P56880 RPS15-208ENST00000591804 711 ntTSL 5 BASIC13.71□□□□□ -0.21
CLDN20P56880 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
CLDN20P56880 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
CLDN20P56880 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
CLDN20P56880 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CLDN20P56880 AL122018.1-201ENST00000446607 2310 ntBASIC13.71□□□□□ -0.21
CLDN20P56880 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
CLDN20P56880 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC13.71□□□□□ -0.21
CLDN20P56880 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CLDN20P56880 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CLDN20P56880 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC13.71□□□□□ -0.22
CLDN20P56880 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC13.71□□□□□ -0.22
CLDN20P56880 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
CLDN20P56880 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC13.71□□□□□ -0.22
CLDN20P56880 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC13.71□□□□□ -0.22
CLDN20P56880 AC092135.3-201ENST00000624151 1846 ntBASIC13.71□□□□□ -0.22
CLDN20P56880 TCAF1P1-201ENST00000414990 2232 ntBASIC13.71□□□□□ -0.22
CLDN20P56880 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC13.71□□□□□ -0.22
CLDN20P56880 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.22
CLDN20P56880 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
CLDN20P56880 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC13.71□□□□□ -0.22
CLDN20P56880 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
CLDN20P56880 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
CLDN20P56880 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
CLDN20P56880 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
CLDN20P56880 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
CLDN20P56880 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
CLDN20P56880 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC13.7□□□□□ -0.22
CLDN20P56880 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
CLDN20P56880 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC13.7□□□□□ -0.22
CLDN20P56880 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CLDN20P56880 AL359881.3-201ENST00000602640 1721 ntBASIC13.7□□□□□ -0.22
CLDN20P56880 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC13.7□□□□□ -0.22
CLDN20P56880 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC13.7□□□□□ -0.22
CLDN20P56880 CICP8-201ENST00000455800 2813 ntBASIC13.7□□□□□ -0.22
CLDN20P56880 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CLDN20P56880 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CLDN20P56880 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC13.7□□□□□ -0.22
CLDN20P56880 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC13.7□□□□□ -0.22
CLDN20P56880 AL138709.1-201ENST00000614840 1693 ntBASIC13.7□□□□□ -0.22
CLDN20P56880 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CLDN20P56880 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CLDN20P56880 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
CLDN20P56880 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
CLDN20P56880 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC13.7□□□□□ -0.22
CLDN20P56880 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
CLDN20P56880 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
CLDN20P56880 MIR658-201ENST00000385210 100 ntBASIC13.7□□□□□ -0.22
CLDN20P56880 BOLA2P3-201ENST00000404566 256 ntBASIC13.7□□□□□ -0.22
CLDN20P56880 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CLDN20P56880 AC016694.1-201ENST00000434179 700 ntBASIC13.7□□□□□ -0.22
CLDN20P56880 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC13.7□□□□□ -0.22
CLDN20P56880 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CLDN20P56880 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
CLDN20P56880 AC022210.1-201ENST00000449856 793 ntBASIC13.7□□□□□ -0.22
CLDN20P56880 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC13.7□□□□□ -0.22
CLDN20P56880 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC13.7□□□□□ -0.22
CLDN20P56880 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC13.7□□□□□ -0.22
CLDN20P56880 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC13.7□□□□□ -0.22
CLDN20P56880 MIR6775-201ENST00000617557 69 ntBASIC13.7□□□□□ -0.22
CLDN20P56880 PFAS-212ENST00000625942 396 ntTSL 5 BASIC13.7□□□□□ -0.22
CLDN20P56880 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC13.7□□□□□ -0.22
CLDN20P56880 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
CLDN20P56880 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CLDN20P56880 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
CLDN20P56880 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
CLDN20P56880 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CLDN20P56880 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
CLDN20P56880 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC13.7□□□□□ -0.22
CLDN20P56880 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
CLDN20P56880 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CLDN20P56880 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC13.7□□□□□ -0.22
CLDN20P56880 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
CLDN20P56880 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
CLDN20P56880 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CLDN20P56880 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 84.7 ms