Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
PDX1P52945 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
PDX1P52945 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
PDX1P52945 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
PDX1P52945 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
PDX1P52945 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
PDX1P52945 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC14.46□□□□□ -0.09
PDX1P52945 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC14.46□□□□□ -0.09
PDX1P52945 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
PDX1P52945 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
PDX1P52945 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
PDX1P52945 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
PDX1P52945 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
PDX1P52945 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
PDX1P52945 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.09
PDX1P52945 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
PDX1P52945 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
PDX1P52945 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
PDX1P52945 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC14.46□□□□□ -0.09
PDX1P52945 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC14.46□□□□□ -0.09
PDX1P52945 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
PDX1P52945 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
PDX1P52945 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
PDX1P52945 RPL5P21-201ENST00000404620 815 ntBASIC14.46□□□□□ -0.09
PDX1P52945 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC14.46□□□□□ -0.09
PDX1P52945 PTPA-217ENST00000434095 870 ntTSL 2 BASIC14.46□□□□□ -0.09
PDX1P52945 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC14.46□□□□□ -0.09
PDX1P52945 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
PDX1P52945 AC005740.2-201ENST00000511085 419 ntBASIC14.46□□□□□ -0.09
PDX1P52945 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC14.46□□□□□ -0.09
PDX1P52945 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC14.46□□□□□ -0.09
PDX1P52945 FGFR3P5-201ENST00000564496 886 ntBASIC14.46□□□□□ -0.09
PDX1P52945 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
PDX1P52945 RN7SL774P-201ENST00000577467 290 ntBASIC14.46□□□□□ -0.09
PDX1P52945 MIR4683-201ENST00000579659 81 ntBASIC14.46□□□□□ -0.09
PDX1P52945 MIR4706-201ENST00000582134 82 ntBASIC14.46□□□□□ -0.09
PDX1P52945 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC14.46□□□□□ -0.09
PDX1P52945 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC14.46□□□□□ -0.09
PDX1P52945 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
PDX1P52945 BNIP3P13-201ENST00000599968 566 ntBASIC14.46□□□□□ -0.09
PDX1P52945 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
PDX1P52945 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
PDX1P52945 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
PDX1P52945 AP000593.2-201ENST00000542775 1433 ntBASIC14.46□□□□□ -0.09
PDX1P52945 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
PDX1P52945 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
PDX1P52945 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
PDX1P52945 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC14.46□□□□□ -0.1
PDX1P52945 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.1
PDX1P52945 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
PDX1P52945 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
PDX1P52945 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC14.46□□□□□ -0.1
PDX1P52945 AC008132.1-202ENST00000342005 1389 ntBASIC14.46□□□□□ -0.1
PDX1P52945 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
PDX1P52945 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
PDX1P52945 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
PDX1P52945 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
PDX1P52945 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.1
PDX1P52945 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC14.46□□□□□ -0.1
PDX1P52945 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
PDX1P52945 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
PDX1P52945 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC14.45□□□□□ -0.1
PDX1P52945 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
PDX1P52945 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
PDX1P52945 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC14.45□□□□□ -0.1
PDX1P52945 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC14.45□□□□□ -0.1
PDX1P52945 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PDX1P52945 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
PDX1P52945 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
PDX1P52945 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
PDX1P52945 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
PDX1P52945 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
PDX1P52945 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PDX1P52945 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PDX1P52945 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
PDX1P52945 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
PDX1P52945 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC14.45□□□□□ -0.1
PDX1P52945 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC14.45□□□□□ -0.1
PDX1P52945 RNMTL1P1-201ENST00000454103 560 ntBASIC14.45□□□□□ -0.1
PDX1P52945 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC14.45□□□□□ -0.1
PDX1P52945 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PDX1P52945 AC008438.1-201ENST00000507521 549 ntTSL 2 BASIC14.45□□□□□ -0.1
PDX1P52945 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC14.45□□□□□ -0.1
PDX1P52945 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
PDX1P52945 AC013355.1-201ENST00000562625 723 ntBASIC14.45□□□□□ -0.1
PDX1P52945 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC14.45□□□□□ -0.1
PDX1P52945 AC026740.1-201ENST00000607068 791 ntBASIC14.45□□□□□ -0.1
PDX1P52945 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
PDX1P52945 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
PDX1P52945 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
PDX1P52945 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
PDX1P52945 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PDX1P52945 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
PDX1P52945 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PDX1P52945 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PDX1P52945 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC14.45□□□□□ -0.1
PDX1P52945 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC14.45□□□□□ -0.1
PDX1P52945 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PDX1P52945 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
PDX1P52945 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 61.7 ms