Protein–RNA interactions for Protein: P49454

CENPF, Centromere protein F, humanhuman

Predictions only

Length 3,210 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPFP49454 LST1-204ENST00000376086 554 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CENPFP49454 CSHL1-206ENST00000450719 973 ntTSL 2 BASIC16.3■□□□□ 0.2
CENPFP49454 AC007250.1-201ENST00000608934 338 ntBASIC16.3■□□□□ 0.2
CENPFP49454 RARS-210ENST00000626454 177 ntTSL 5 BASIC16.3■□□□□ 0.2
CENPFP49454 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CENPFP49454 MSANTD2P1-201ENST00000445341 1368 ntBASIC16.3■□□□□ 0.2
CENPFP49454 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC16.3■□□□□ 0.2
CENPFP49454 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CENPFP49454 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC16.3■□□□□ 0.2
CENPFP49454 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC16.3■□□□□ 0.2
CENPFP49454 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC16.3■□□□□ 0.2
CENPFP49454 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC16.3■□□□□ 0.2
CENPFP49454 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC16.3■□□□□ 0.2
CENPFP49454 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC16.3■□□□□ 0.2
CENPFP49454 LAMA1-209ENST00000638611 1310 ntTSL 5 BASIC16.3■□□□□ 0.2
CENPFP49454 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CENPFP49454 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CENPFP49454 POLR3H-204ENST00000407461 802 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CENPFP49454 RN7SL846P-201ENST00000467429 292 ntBASIC16.3■□□□□ 0.2
CENPFP49454 YPEL4-209ENST00000534711 889 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
CENPFP49454 KNOP1P1-201ENST00000542108 989 ntBASIC16.3■□□□□ 0.2
CENPFP49454 AC104590.1-201ENST00000560813 648 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CENPFP49454 KLKP1-202ENST00000597246 1125 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CENPFP49454 AL135936.1-201ENST00000617956 998 ntTSL 5 BASIC16.3■□□□□ 0.2
CENPFP49454 HIST1H3B-201ENST00000621411 411 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
CENPFP49454 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CENPFP49454 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
CENPFP49454 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC16.3■□□□□ 0.2
CENPFP49454 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
CENPFP49454 AC087481.3-201ENST00000602886 1894 ntBASIC16.3■□□□□ 0.2
CENPFP49454 UBE2L5P-202ENST00000635918 1513 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
CENPFP49454 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CENPFP49454 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC16.3■□□□□ 0.2
CENPFP49454 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CENPFP49454 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC16.3■□□□□ 0.2
CENPFP49454 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CENPFP49454 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC16.3■□□□□ 0.2
CENPFP49454 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
CENPFP49454 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CENPFP49454 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CENPFP49454 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CENPFP49454 AURKB-201ENST00000316199 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CENPFP49454 KIR2DL4-207ENST00000396293 715 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CENPFP49454 FOXP4-AS1-202ENST00000432751 409 ntTSL 2 BASIC16.3■□□□□ 0.2
CENPFP49454 GNAT1-202ENST00000433068 1224 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
CENPFP49454 AC092580.1-201ENST00000433998 658 ntBASIC16.3■□□□□ 0.2
CENPFP49454 AC011383.1-201ENST00000517474 617 ntTSL 3 BASIC16.3■□□□□ 0.2
CENPFP49454 KHDRBS3-206ENST00000520981 1243 ntTSL 5 BASIC16.3■□□□□ 0.2
CENPFP49454 TMEM123-208ENST00000532161 743 ntAPPRIS ALT2 TSL 3 BASIC16.3■□□□□ 0.2
CENPFP49454 AC007298.2-201ENST00000551849 862 ntTSL 3 BASIC16.3■□□□□ 0.2
CENPFP49454 AC084262.1-201ENST00000567818 751 ntBASIC16.3■□□□□ 0.2
CENPFP49454 AC080013.5-201ENST00000607044 679 ntBASIC16.3■□□□□ 0.2
CENPFP49454 ST5-261ENST00000626808 1071 ntTSL 5 BASIC16.3■□□□□ 0.2
CENPFP49454 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CENPFP49454 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC16.3■□□□□ 0.2
CENPFP49454 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CENPFP49454 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CENPFP49454 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CENPFP49454 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
CENPFP49454 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
CENPFP49454 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC16.3■□□□□ 0.2
CENPFP49454 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CENPFP49454 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CENPFP49454 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC16.29■□□□□ 0.2
CENPFP49454 MC5R-201ENST00000324750 1319 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
CENPFP49454 AC023024.2-201ENST00000623561 1993 ntBASIC16.29■□□□□ 0.2
CENPFP49454 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CENPFP49454 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC16.29■□□□□ 0.2
CENPFP49454 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CENPFP49454 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CENPFP49454 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC16.29■□□□□ 0.2
CENPFP49454 MRPL18-201ENST00000367034 978 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CENPFP49454 HIST1H4B-201ENST00000377745 438 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
CENPFP49454 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CENPFP49454 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
CENPFP49454 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CENPFP49454 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC16.29■□□□□ 0.2
CENPFP49454 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CENPFP49454 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC16.29■□□□□ 0.2
CENPFP49454 TNNT1-202ENST00000356783 934 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CENPFP49454 PGAM1P11-201ENST00000416729 680 ntBASIC16.29■□□□□ 0.2
CENPFP49454 RN7SL23P-201ENST00000484055 275 ntBASIC16.29■□□□□ 0.2
CENPFP49454 AC068831.5-201ENST00000557387 328 ntBASIC16.29■□□□□ 0.2
CENPFP49454 AC023968.2-201ENST00000560593 1049 ntBASIC16.29■□□□□ 0.2
CENPFP49454 AC124068.2-201ENST00000569473 1109 ntBASIC16.29■□□□□ 0.2
CENPFP49454 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
CENPFP49454 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CENPFP49454 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC16.29■□□□□ 0.2
CENPFP49454 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CENPFP49454 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC16.28■□□□□ 0.2
CENPFP49454 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
CENPFP49454 COX14-201ENST00000317943 708 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
CENPFP49454 LCN6-201ENST00000341206 717 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CENPFP49454 TMEM95-202ENST00000389982 1191 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CENPFP49454 BAX-205ENST00000391871 687 ntTSL 5 BASIC16.28■□□□□ 0.2
CENPFP49454 GNG10P1-201ENST00000452289 199 ntBASIC16.28■□□□□ 0.2
CENPFP49454 RN7SL288P-201ENST00000490496 291 ntBASIC16.28■□□□□ 0.2
CENPFP49454 KRT8P2-201ENST00000556193 944 ntBASIC16.28■□□□□ 0.2
CENPFP49454 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC16.28■□□□□ 0.2
CENPFP49454 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 75.4 ms