Protein–RNA interactions for Protein: P01906

HLA-DQA2, HLA class II histocompatibility antigen, DQ alpha 2 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA2P01906 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
HLA-DQA2P01906 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
HLA-DQA2P01906 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.25
HLA-DQA2P01906 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
HLA-DQA2P01906 MUC1-223ENST00000611571 4170 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
HLA-DQA2P01906 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
HLA-DQA2P01906 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
HLA-DQA2P01906 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
HLA-DQA2P01906 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC13.46□□□□□ -0.25
HLA-DQA2P01906 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
HLA-DQA2P01906 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
HLA-DQA2P01906 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC13.46□□□□□ -0.25
HLA-DQA2P01906 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC13.46□□□□□ -0.25
HLA-DQA2P01906 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
HLA-DQA2P01906 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC13.46□□□□□ -0.25
HLA-DQA2P01906 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC13.46□□□□□ -0.25
HLA-DQA2P01906 HNRNPA1P40-201ENST00000426371 1278 ntBASIC13.46□□□□□ -0.25
HLA-DQA2P01906 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC13.46□□□□□ -0.25
HLA-DQA2P01906 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
HLA-DQA2P01906 RN7SL399P-201ENST00000471648 279 ntBASIC13.46□□□□□ -0.25
HLA-DQA2P01906 AC104596.2-201ENST00000512793 793 ntBASIC13.46□□□□□ -0.25
HLA-DQA2P01906 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC13.46□□□□□ -0.25
HLA-DQA2P01906 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC13.46□□□□□ -0.25
HLA-DQA2P01906 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC13.46□□□□□ -0.25
HLA-DQA2P01906 AC023310.3-201ENST00000557027 670 ntBASIC13.46□□□□□ -0.25
HLA-DQA2P01906 AC100756.1-201ENST00000562736 682 ntBASIC13.46□□□□□ -0.25
HLA-DQA2P01906 AC138749.3-201ENST00000567691 622 ntBASIC13.46□□□□□ -0.25
HLA-DQA2P01906 ARL16-202ENST00000570561 768 ntTSL 2 BASIC13.46□□□□□ -0.25
HLA-DQA2P01906 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC13.46□□□□□ -0.25
HLA-DQA2P01906 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
HLA-DQA2P01906 AL390955.2-201ENST00000603032 514 ntBASIC13.46□□□□□ -0.25
HLA-DQA2P01906 RNA5-8SN1-201ENST00000610460 153 ntBASIC13.46□□□□□ -0.25
HLA-DQA2P01906 AC116165.1-201ENST00000611806 668 ntBASIC13.46□□□□□ -0.25
HLA-DQA2P01906 RNA5-8SN5-202ENST00000612463 153 ntBASIC13.46□□□□□ -0.25
HLA-DQA2P01906 RNA5-8SN4-201ENST00000613359 153 ntBASIC13.46□□□□□ -0.25
HLA-DQA2P01906 RNA5-8SN5-201ENST00000619471 153 ntBASIC13.46□□□□□ -0.25
HLA-DQA2P01906 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC13.46□□□□□ -0.25
HLA-DQA2P01906 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
HLA-DQA2P01906 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
HLA-DQA2P01906 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
HLA-DQA2P01906 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC13.46□□□□□ -0.26
HLA-DQA2P01906 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
HLA-DQA2P01906 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
HLA-DQA2P01906 PASK-204ENST00000405260 4942 ntAPPRIS P3 TSL 5 BASIC13.46□□□□□ -0.26
HLA-DQA2P01906 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC13.46□□□□□ -0.26
HLA-DQA2P01906 HAGLR-202ENST00000416928 4235 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
HLA-DQA2P01906 CACNA1G-229ENST00000514181 6795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
HLA-DQA2P01906 HECTD2-201ENST00000298068 4802 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
HLA-DQA2P01906 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
HLA-DQA2P01906 PHLDB1-201ENST00000356063 5240 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.26
HLA-DQA2P01906 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
HLA-DQA2P01906 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
HLA-DQA2P01906 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC13.45□□□□□ -0.26
HLA-DQA2P01906 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
HLA-DQA2P01906 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
HLA-DQA2P01906 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
HLA-DQA2P01906 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
HLA-DQA2P01906 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
HLA-DQA2P01906 UNC13B-202ENST00000378496 5063 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
HLA-DQA2P01906 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC13.45□□□□□ -0.26
HLA-DQA2P01906 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC13.45□□□□□ -0.26
HLA-DQA2P01906 NEK4-201ENST00000233027 6057 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
HLA-DQA2P01906 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
HLA-DQA2P01906 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
HLA-DQA2P01906 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
HLA-DQA2P01906 TRMT1L-201ENST00000367506 4392 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
HLA-DQA2P01906 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
HLA-DQA2P01906 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC13.45□□□□□ -0.26
HLA-DQA2P01906 PRDM15-207ENST00000447207 4928 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
HLA-DQA2P01906 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
HLA-DQA2P01906 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
HLA-DQA2P01906 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
HLA-DQA2P01906 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
HLA-DQA2P01906 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
HLA-DQA2P01906 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC13.45□□□□□ -0.26
HLA-DQA2P01906 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
HLA-DQA2P01906 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
HLA-DQA2P01906 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
HLA-DQA2P01906 AL645937.2-201ENST00000396808 931 ntBASIC13.45□□□□□ -0.26
HLA-DQA2P01906 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
HLA-DQA2P01906 MEP1AP4-201ENST00000423244 1087 ntBASIC13.45□□□□□ -0.26
HLA-DQA2P01906 AL353779.1-201ENST00000434793 351 ntBASIC13.45□□□□□ -0.26
HLA-DQA2P01906 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
HLA-DQA2P01906 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
HLA-DQA2P01906 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC13.45□□□□□ -0.26
HLA-DQA2P01906 GAPDHP40-201ENST00000505218 1006 ntBASIC13.45□□□□□ -0.26
HLA-DQA2P01906 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC13.45□□□□□ -0.26
HLA-DQA2P01906 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC13.45□□□□□ -0.26
HLA-DQA2P01906 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC13.45□□□□□ -0.26
HLA-DQA2P01906 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC13.45□□□□□ -0.26
HLA-DQA2P01906 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
HLA-DQA2P01906 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
HLA-DQA2P01906 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC13.45□□□□□ -0.26
HLA-DQA2P01906 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
HLA-DQA2P01906 ZNF335-201ENST00000322927 4430 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
HLA-DQA2P01906 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
HLA-DQA2P01906 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
HLA-DQA2P01906 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
HLA-DQA2P01906 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
HLA-DQA2P01906 ZEB2-204ENST00000409487 5361 ntAPPRIS P2 TSL 5 BASIC13.45□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms