Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RCCD1A6NED2 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
RCCD1A6NED2 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RCCD1A6NED2 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
RCCD1A6NED2 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
RCCD1A6NED2 AL157996.1-201ENST00000624684 2299 ntBASIC15.84■□□□□ 0.13
RCCD1A6NED2 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RCCD1A6NED2 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RCCD1A6NED2 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
RCCD1A6NED2 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC15.84■□□□□ 0.13
RCCD1A6NED2 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RCCD1A6NED2 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
RCCD1A6NED2 AC027612.1-201ENST00000445234 2395 ntBASIC15.84■□□□□ 0.13
RCCD1A6NED2 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
RCCD1A6NED2 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC15.84■□□□□ 0.13
RCCD1A6NED2 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
RCCD1A6NED2 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
RCCD1A6NED2 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC15.84■□□□□ 0.13
RCCD1A6NED2 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.13
RCCD1A6NED2 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
RCCD1A6NED2 ALOX15B-201ENST00000380173 2605 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
RCCD1A6NED2 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC15.83■□□□□ 0.13
RCCD1A6NED2 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
RCCD1A6NED2 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.13
RCCD1A6NED2 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
RCCD1A6NED2 AC015688.4-201ENST00000580780 1647 ntBASIC15.83■□□□□ 0.13
RCCD1A6NED2 TCAF1P1-201ENST00000414990 2232 ntBASIC15.83■□□□□ 0.13
RCCD1A6NED2 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
RCCD1A6NED2 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
RCCD1A6NED2 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.13
RCCD1A6NED2 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC15.83■□□□□ 0.13
RCCD1A6NED2 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC15.83■□□□□ 0.12
RCCD1A6NED2 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC15.83■□□□□ 0.12
RCCD1A6NED2 CROT-203ENST00000419147 2959 ntTSL 2 BASIC15.83■□□□□ 0.12
RCCD1A6NED2 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
RCCD1A6NED2 KLF2P2-201ENST00000416807 1039 ntBASIC15.83■□□□□ 0.12
RCCD1A6NED2 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC15.83■□□□□ 0.12
RCCD1A6NED2 AC007969.1-201ENST00000433675 447 ntBASIC15.83■□□□□ 0.12
RCCD1A6NED2 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC15.83■□□□□ 0.12
RCCD1A6NED2 AP001582.1-201ENST00000525856 295 ntBASIC15.83■□□□□ 0.12
RCCD1A6NED2 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC15.83■□□□□ 0.12
RCCD1A6NED2 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC15.83■□□□□ 0.12
RCCD1A6NED2 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC15.83■□□□□ 0.12
RCCD1A6NED2 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC15.83■□□□□ 0.12
RCCD1A6NED2 AL390955.2-201ENST00000603032 514 ntBASIC15.83■□□□□ 0.12
RCCD1A6NED2 RNA5-8SN1-201ENST00000610460 153 ntBASIC15.83■□□□□ 0.12
RCCD1A6NED2 RNA5-8SN5-202ENST00000612463 153 ntBASIC15.83■□□□□ 0.12
RCCD1A6NED2 RNA5-8SN4-201ENST00000613359 153 ntBASIC15.83■□□□□ 0.12
RCCD1A6NED2 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC15.83■□□□□ 0.12
RCCD1A6NED2 RNA5-8SN5-201ENST00000619471 153 ntBASIC15.83■□□□□ 0.12
RCCD1A6NED2 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC15.83■□□□□ 0.12
RCCD1A6NED2 AC007431.3-201ENST00000623221 587 ntBASIC15.83■□□□□ 0.12
RCCD1A6NED2 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC15.83■□□□□ 0.12
RCCD1A6NED2 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
RCCD1A6NED2 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
RCCD1A6NED2 INTS4P2-202ENST00000614726 2019 ntBASIC15.83■□□□□ 0.12
RCCD1A6NED2 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RCCD1A6NED2 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RCCD1A6NED2 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RCCD1A6NED2 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
RCCD1A6NED2 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
RCCD1A6NED2 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC15.83■□□□□ 0.12
RCCD1A6NED2 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RCCD1A6NED2 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
RCCD1A6NED2 ALAD-201ENST00000409155 3173 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RCCD1A6NED2 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC15.83■□□□□ 0.12
RCCD1A6NED2 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RCCD1A6NED2 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
RCCD1A6NED2 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RCCD1A6NED2 HADH-202ENST00000403312 1752 ntTSL 5 BASIC15.82■□□□□ 0.12
RCCD1A6NED2 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RCCD1A6NED2 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RCCD1A6NED2 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
RCCD1A6NED2 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC15.82■□□□□ 0.12
RCCD1A6NED2 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RCCD1A6NED2 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RCCD1A6NED2 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
RCCD1A6NED2 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
RCCD1A6NED2 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC15.82■□□□□ 0.12
RCCD1A6NED2 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
RCCD1A6NED2 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
RCCD1A6NED2 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
RCCD1A6NED2 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
RCCD1A6NED2 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RCCD1A6NED2 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC15.82■□□□□ 0.12
RCCD1A6NED2 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC15.82■□□□□ 0.12
RCCD1A6NED2 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC15.82■□□□□ 0.12
RCCD1A6NED2 HLA-DRB6-201ENST00000411500 1235 ntBASIC15.82■□□□□ 0.12
RCCD1A6NED2 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC15.82■□□□□ 0.12
RCCD1A6NED2 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC15.82■□□□□ 0.12
RCCD1A6NED2 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC15.82■□□□□ 0.12
RCCD1A6NED2 GNAQP1-201ENST00000444815 1067 ntBASIC15.82■□□□□ 0.12
RCCD1A6NED2 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC15.82■□□□□ 0.12
RCCD1A6NED2 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RCCD1A6NED2 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC15.82■□□□□ 0.12
RCCD1A6NED2 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC15.82■□□□□ 0.12
RCCD1A6NED2 TPRX2P-201ENST00000535362 881 ntBASIC15.82■□□□□ 0.12
RCCD1A6NED2 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC15.82■□□□□ 0.12
RCCD1A6NED2 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC15.82■□□□□ 0.12
RCCD1A6NED2 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC15.82■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 55.5 ms