Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
SSX2IPQ9Y2D8 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
SSX2IPQ9Y2D8 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
SSX2IPQ9Y2D8 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SSX2IPQ9Y2D8 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC16.06■□□□□ 0.16
SSX2IPQ9Y2D8 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SSX2IPQ9Y2D8 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
SSX2IPQ9Y2D8 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SSX2IPQ9Y2D8 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC16.06■□□□□ 0.16
SSX2IPQ9Y2D8 AP000593.2-201ENST00000542775 1433 ntBASIC16.06■□□□□ 0.16
SSX2IPQ9Y2D8 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC16.06■□□□□ 0.16
SSX2IPQ9Y2D8 FKBP4P6-201ENST00000457486 1332 ntBASIC16.06■□□□□ 0.16
SSX2IPQ9Y2D8 ELK2AP-201ENST00000392510 1007 ntBASIC16.06■□□□□ 0.16
SSX2IPQ9Y2D8 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SSX2IPQ9Y2D8 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC16.06■□□□□ 0.16
SSX2IPQ9Y2D8 NKAIN1P1-201ENST00000435754 582 ntBASIC16.06■□□□□ 0.16
SSX2IPQ9Y2D8 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC16.06■□□□□ 0.16
SSX2IPQ9Y2D8 AL133466.1-201ENST00000447582 150 ntBASIC16.06■□□□□ 0.16
SSX2IPQ9Y2D8 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SSX2IPQ9Y2D8 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC16.06■□□□□ 0.16
SSX2IPQ9Y2D8 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC16.06■□□□□ 0.16
SSX2IPQ9Y2D8 AC044849.1-201ENST00000519737 1188 ntBASIC16.06■□□□□ 0.16
SSX2IPQ9Y2D8 AP003171.2-201ENST00000528208 925 ntBASIC16.06■□□□□ 0.16
SSX2IPQ9Y2D8 RN7SL190P-201ENST00000582519 257 ntBASIC16.06■□□□□ 0.16
SSX2IPQ9Y2D8 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC16.06■□□□□ 0.16
SSX2IPQ9Y2D8 CU633904.3-201ENST00000624042 1029 ntBASIC16.06■□□□□ 0.16
SSX2IPQ9Y2D8 AC015967.2-201ENST00000624092 234 ntBASIC16.06■□□□□ 0.16
SSX2IPQ9Y2D8 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC16.06■□□□□ 0.16
SSX2IPQ9Y2D8 AC006435.4-201ENST00000625037 234 ntBASIC16.06■□□□□ 0.16
SSX2IPQ9Y2D8 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SSX2IPQ9Y2D8 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SSX2IPQ9Y2D8 AL356737.1-201ENST00000634391 234 ntBASIC16.06■□□□□ 0.16
SSX2IPQ9Y2D8 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SSX2IPQ9Y2D8 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
SSX2IPQ9Y2D8 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC16.06■□□□□ 0.16
SSX2IPQ9Y2D8 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
SSX2IPQ9Y2D8 PPT1-215ENST00000641471 2368 ntBASIC16.06■□□□□ 0.16
SSX2IPQ9Y2D8 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SSX2IPQ9Y2D8 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
SSX2IPQ9Y2D8 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
SSX2IPQ9Y2D8 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
SSX2IPQ9Y2D8 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SSX2IPQ9Y2D8 ADGRL1-201ENST00000340736 7853 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
SSX2IPQ9Y2D8 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC16.05■□□□□ 0.16
SSX2IPQ9Y2D8 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
SSX2IPQ9Y2D8 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SSX2IPQ9Y2D8 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SSX2IPQ9Y2D8 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SSX2IPQ9Y2D8 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC16.05■□□□□ 0.16
SSX2IPQ9Y2D8 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SSX2IPQ9Y2D8 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SSX2IPQ9Y2D8 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SSX2IPQ9Y2D8 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC16.05■□□□□ 0.16
SSX2IPQ9Y2D8 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SSX2IPQ9Y2D8 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC16.05■□□□□ 0.16
SSX2IPQ9Y2D8 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
SSX2IPQ9Y2D8 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC16.05■□□□□ 0.16
SSX2IPQ9Y2D8 AL360270.3-201ENST00000609118 1348 ntBASIC16.05■□□□□ 0.16
SSX2IPQ9Y2D8 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
SSX2IPQ9Y2D8 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SSX2IPQ9Y2D8 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
SSX2IPQ9Y2D8 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SSX2IPQ9Y2D8 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC16.05■□□□□ 0.16
SSX2IPQ9Y2D8 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
SSX2IPQ9Y2D8 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SSX2IPQ9Y2D8 AC011742.3-201ENST00000439053 820 ntBASIC16.05■□□□□ 0.16
SSX2IPQ9Y2D8 RN7SL769P-201ENST00000469386 295 ntBASIC16.05■□□□□ 0.16
SSX2IPQ9Y2D8 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC16.05■□□□□ 0.16
SSX2IPQ9Y2D8 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC16.05■□□□□ 0.16
SSX2IPQ9Y2D8 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC16.05■□□□□ 0.16
SSX2IPQ9Y2D8 FOS-206ENST00000555347 1280 ntTSL 2 BASIC16.05■□□□□ 0.16
SSX2IPQ9Y2D8 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC16.05■□□□□ 0.16
SSX2IPQ9Y2D8 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC16.05■□□□□ 0.16
SSX2IPQ9Y2D8 KLK3-207ENST00000595952 969 ntTSL 3 BASIC16.05■□□□□ 0.16
SSX2IPQ9Y2D8 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC16.05■□□□□ 0.16
SSX2IPQ9Y2D8 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC16.05■□□□□ 0.16
SSX2IPQ9Y2D8 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
SSX2IPQ9Y2D8 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC16.05■□□□□ 0.16
SSX2IPQ9Y2D8 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SSX2IPQ9Y2D8 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC16.05■□□□□ 0.16
SSX2IPQ9Y2D8 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
SSX2IPQ9Y2D8 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
SSX2IPQ9Y2D8 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC16.05■□□□□ 0.16
SSX2IPQ9Y2D8 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SSX2IPQ9Y2D8 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC16.05■□□□□ 0.16
SSX2IPQ9Y2D8 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC16.05■□□□□ 0.16
SSX2IPQ9Y2D8 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SSX2IPQ9Y2D8 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
SSX2IPQ9Y2D8 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SSX2IPQ9Y2D8 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SSX2IPQ9Y2D8 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC16.04■□□□□ 0.16
SSX2IPQ9Y2D8 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SSX2IPQ9Y2D8 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC16.04■□□□□ 0.16
SSX2IPQ9Y2D8 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
SSX2IPQ9Y2D8 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SSX2IPQ9Y2D8 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SSX2IPQ9Y2D8 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
SSX2IPQ9Y2D8 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
SSX2IPQ9Y2D8 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SSX2IPQ9Y2D8 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms