Protein–RNA interactions for Protein: Q9BSM1

PCGF1, Polycomb group RING finger protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1Q9BSM1 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
PCGF1Q9BSM1 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
PCGF1Q9BSM1 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
PCGF1Q9BSM1 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
PCGF1Q9BSM1 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC12.61□□□□□ -0.39
PCGF1Q9BSM1 AGER-206ENST00000375070 1463 ntTSL 5 BASIC12.61□□□□□ -0.39
PCGF1Q9BSM1 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
PCGF1Q9BSM1 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC12.61□□□□□ -0.39
PCGF1Q9BSM1 WASH3P-207ENST00000560956 1394 ntBASIC12.61□□□□□ -0.39
PCGF1Q9BSM1 PARN-202ENST00000420015 2360 ntTSL 2 BASIC12.61□□□□□ -0.39
PCGF1Q9BSM1 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
PCGF1Q9BSM1 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
PCGF1Q9BSM1 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC12.61□□□□□ -0.39
PCGF1Q9BSM1 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC12.61□□□□□ -0.39
PCGF1Q9BSM1 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC12.61□□□□□ -0.39
PCGF1Q9BSM1 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC12.61□□□□□ -0.39
PCGF1Q9BSM1 AC016694.1-201ENST00000434179 700 ntBASIC12.61□□□□□ -0.39
PCGF1Q9BSM1 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC12.61□□□□□ -0.39
PCGF1Q9BSM1 AC007551.1-201ENST00000457394 519 ntBASIC12.61□□□□□ -0.39
PCGF1Q9BSM1 FTH1P14-201ENST00000482930 551 ntBASIC12.61□□□□□ -0.39
PCGF1Q9BSM1 GAPDHP40-201ENST00000505218 1006 ntBASIC12.61□□□□□ -0.39
PCGF1Q9BSM1 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC12.61□□□□□ -0.39
PCGF1Q9BSM1 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC12.61□□□□□ -0.39
PCGF1Q9BSM1 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
PCGF1Q9BSM1 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC12.61□□□□□ -0.39
PCGF1Q9BSM1 COX11-210ENST00000639671 696 ntBASIC12.61□□□□□ -0.39
PCGF1Q9BSM1 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
PCGF1Q9BSM1 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
PCGF1Q9BSM1 AC010327.5-201ENST00000586923 3061 ntBASIC12.61□□□□□ -0.39
PCGF1Q9BSM1 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
PCGF1Q9BSM1 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
PCGF1Q9BSM1 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC12.61□□□□□ -0.39
PCGF1Q9BSM1 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
PCGF1Q9BSM1 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
PCGF1Q9BSM1 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
PCGF1Q9BSM1 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
PCGF1Q9BSM1 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
PCGF1Q9BSM1 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
PCGF1Q9BSM1 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
PCGF1Q9BSM1 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
PCGF1Q9BSM1 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
PCGF1Q9BSM1 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
PCGF1Q9BSM1 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
PCGF1Q9BSM1 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
PCGF1Q9BSM1 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
PCGF1Q9BSM1 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC12.61□□□□□ -0.39
PCGF1Q9BSM1 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
PCGF1Q9BSM1 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC12.61□□□□□ -0.39
PCGF1Q9BSM1 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
PCGF1Q9BSM1 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC12.61□□□□□ -0.39
PCGF1Q9BSM1 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
PCGF1Q9BSM1 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
PCGF1Q9BSM1 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC12.61□□□□□ -0.39
PCGF1Q9BSM1 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
PCGF1Q9BSM1 USP28-214ENST00000545540 3431 ntTSL 2 BASIC12.6□□□□□ -0.39
PCGF1Q9BSM1 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
PCGF1Q9BSM1 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
PCGF1Q9BSM1 MROH4P-201ENST00000431302 1578 ntBASIC12.6□□□□□ -0.39
PCGF1Q9BSM1 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
PCGF1Q9BSM1 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC12.6□□□□□ -0.39
PCGF1Q9BSM1 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
PCGF1Q9BSM1 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC12.6□□□□□ -0.39
PCGF1Q9BSM1 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC12.6□□□□□ -0.39
PCGF1Q9BSM1 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
PCGF1Q9BSM1 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
PCGF1Q9BSM1 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
PCGF1Q9BSM1 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
PCGF1Q9BSM1 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC12.6□□□□□ -0.39
PCGF1Q9BSM1 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
PCGF1Q9BSM1 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
PCGF1Q9BSM1 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
PCGF1Q9BSM1 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC12.6□□□□□ -0.39
PCGF1Q9BSM1 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC12.6□□□□□ -0.39
PCGF1Q9BSM1 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
PCGF1Q9BSM1 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
PCGF1Q9BSM1 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
PCGF1Q9BSM1 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC12.6□□□□□ -0.39
PCGF1Q9BSM1 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
PCGF1Q9BSM1 GHSR-202ENST00000427970 912 ntBASIC12.6□□□□□ -0.39
PCGF1Q9BSM1 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC12.6□□□□□ -0.39
PCGF1Q9BSM1 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC12.6□□□□□ -0.39
PCGF1Q9BSM1 AC022137.2-201ENST00000503482 481 ntBASIC12.6□□□□□ -0.39
PCGF1Q9BSM1 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC12.6□□□□□ -0.39
PCGF1Q9BSM1 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC12.6□□□□□ -0.39
PCGF1Q9BSM1 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC12.6□□□□□ -0.39
PCGF1Q9BSM1 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
PCGF1Q9BSM1 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC12.6□□□□□ -0.39
PCGF1Q9BSM1 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC12.6□□□□□ -0.39
PCGF1Q9BSM1 Six3os1_5.1-201ENST00000611000 271 ntBASIC12.6□□□□□ -0.39
PCGF1Q9BSM1 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC12.6□□□□□ -0.39
PCGF1Q9BSM1 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
PCGF1Q9BSM1 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
PCGF1Q9BSM1 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
PCGF1Q9BSM1 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC12.6□□□□□ -0.39
PCGF1Q9BSM1 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
PCGF1Q9BSM1 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
PCGF1Q9BSM1 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
PCGF1Q9BSM1 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
PCGF1Q9BSM1 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
PCGF1Q9BSM1 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms