Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RIF1Q5UIP0 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RIF1Q5UIP0 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RIF1Q5UIP0 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
RIF1Q5UIP0 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
RIF1Q5UIP0 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RIF1Q5UIP0 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
RIF1Q5UIP0 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
RIF1Q5UIP0 AL645608.8-201ENST00000606034 2086 ntBASIC14.18□□□□□ -0.14
RIF1Q5UIP0 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
RIF1Q5UIP0 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RIF1Q5UIP0 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
RIF1Q5UIP0 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
RIF1Q5UIP0 COX14-201ENST00000317943 708 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
RIF1Q5UIP0 LINC01693-202ENST00000430123 357 ntTSL 3 BASIC14.18□□□□□ -0.14
RIF1Q5UIP0 SAP18P2-201ENST00000434334 459 ntBASIC14.18□□□□□ -0.14
RIF1Q5UIP0 DLGAP4-AS1-203ENST00000439595 1207 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
RIF1Q5UIP0 RNA5SP406-201ENST00000516106 112 ntBASIC14.18□□□□□ -0.14
RIF1Q5UIP0 AC091304.3-201ENST00000566500 716 ntBASIC14.18□□□□□ -0.14
RIF1Q5UIP0 AC079331.1-201ENST00000623200 1200 ntBASIC14.18□□□□□ -0.14
RIF1Q5UIP0 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC14.18□□□□□ -0.14
RIF1Q5UIP0 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
RIF1Q5UIP0 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RIF1Q5UIP0 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
RIF1Q5UIP0 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RIF1Q5UIP0 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RIF1Q5UIP0 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
RIF1Q5UIP0 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
RIF1Q5UIP0 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RIF1Q5UIP0 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RIF1Q5UIP0 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RIF1Q5UIP0 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
RIF1Q5UIP0 AC127383.1-201ENST00000444697 1800 ntBASIC14.17□□□□□ -0.14
RIF1Q5UIP0 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RIF1Q5UIP0 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC14.17□□□□□ -0.14
RIF1Q5UIP0 PILRA-205ENST00000453419 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
RIF1Q5UIP0 AC108474.1-201ENST00000507776 421 ntTSL 3 BASIC14.17□□□□□ -0.14
RIF1Q5UIP0 MIR4746-201ENST00000579802 71 ntBASIC14.17□□□□□ -0.14
RIF1Q5UIP0 TARM1-202ENST00000616041 1218 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
RIF1Q5UIP0 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RIF1Q5UIP0 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RIF1Q5UIP0 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RIF1Q5UIP0 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
RIF1Q5UIP0 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
RIF1Q5UIP0 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC14.17□□□□□ -0.14
RIF1Q5UIP0 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
RIF1Q5UIP0 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC14.17□□□□□ -0.14
RIF1Q5UIP0 NIPA1-207ENST00000561183 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
RIF1Q5UIP0 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
RIF1Q5UIP0 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
RIF1Q5UIP0 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
RIF1Q5UIP0 ZNF691-201ENST00000372502 1910 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
RIF1Q5UIP0 COPS7B-204ENST00000409091 806 ntTSL 5 BASIC14.17□□□□□ -0.14
RIF1Q5UIP0 SNRPCP15-201ENST00000424055 192 ntBASIC14.17□□□□□ -0.14
RIF1Q5UIP0 FDPSP7-201ENST00000429043 1054 ntBASIC14.17□□□□□ -0.14
RIF1Q5UIP0 AL773545.2-201ENST00000442149 472 ntBASIC14.17□□□□□ -0.14
RIF1Q5UIP0 CITED1-209ENST00000453707 998 ntAPPRIS ALT2 TSL 3 BASIC14.17□□□□□ -0.14
RIF1Q5UIP0 TRBC2-201ENST00000466254 758 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
RIF1Q5UIP0 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC14.17□□□□□ -0.14
RIF1Q5UIP0 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RIF1Q5UIP0 SNORD3B-1-201ENST00000577988 758 ntBASIC14.17□□□□□ -0.14
RIF1Q5UIP0 AC005786.2-201ENST00000592368 369 ntTSL 3 BASIC14.17□□□□□ -0.14
RIF1Q5UIP0 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
RIF1Q5UIP0 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
RIF1Q5UIP0 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
RIF1Q5UIP0 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
RIF1Q5UIP0 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RIF1Q5UIP0 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RIF1Q5UIP0 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
RIF1Q5UIP0 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
RIF1Q5UIP0 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC14.16□□□□□ -0.14
RIF1Q5UIP0 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
RIF1Q5UIP0 CICP13-201ENST00000422015 2789 ntBASIC14.16□□□□□ -0.14
RIF1Q5UIP0 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RIF1Q5UIP0 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RIF1Q5UIP0 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RIF1Q5UIP0 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RIF1Q5UIP0 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
RIF1Q5UIP0 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RIF1Q5UIP0 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC14.16□□□□□ -0.14
RIF1Q5UIP0 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
RIF1Q5UIP0 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
RIF1Q5UIP0 AC112504.1-201ENST00000623415 1841 ntBASIC14.16□□□□□ -0.14
RIF1Q5UIP0 OR2V1-201ENST00000329365 948 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
RIF1Q5UIP0 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RIF1Q5UIP0 HNF1A-AS1-201ENST00000433033 612 ntTSL 3 BASIC14.16□□□□□ -0.14
RIF1Q5UIP0 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC14.16□□□□□ -0.14
RIF1Q5UIP0 AC104964.1-201ENST00000520494 489 ntTSL 2 BASIC14.16□□□□□ -0.14
RIF1Q5UIP0 AC008750.2-201ENST00000526996 627 ntTSL 3 BASIC14.16□□□□□ -0.14
RIF1Q5UIP0 ACY3-202ENST00000529256 933 ntTSL 3 BASIC14.16□□□□□ -0.14
RIF1Q5UIP0 ANAPC11-214ENST00000578544 403 ntTSL 3 BASIC14.16□□□□□ -0.14
RIF1Q5UIP0 AC022966.2-201ENST00000587434 367 ntBASIC14.16□□□□□ -0.14
RIF1Q5UIP0 ZFP36-201ENST00000594045 690 ntTSL 3 BASIC14.16□□□□□ -0.14
RIF1Q5UIP0 AC087072.1-201ENST00000603727 421 ntBASIC14.16□□□□□ -0.14
RIF1Q5UIP0 AC022001.3-201ENST00000606330 596 ntBASIC14.16□□□□□ -0.14
RIF1Q5UIP0 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RIF1Q5UIP0 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
RIF1Q5UIP0 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC14.16□□□□□ -0.14
RIF1Q5UIP0 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC14.16□□□□□ -0.14
RIF1Q5UIP0 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 60.8 ms