Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
CSNK1A1P48729 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CSNK1A1P48729 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC13.31□□□□□ -0.28
CSNK1A1P48729 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC13.31□□□□□ -0.28
CSNK1A1P48729 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
CSNK1A1P48729 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CSNK1A1P48729 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
CSNK1A1P48729 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
CSNK1A1P48729 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC13.31□□□□□ -0.28
CSNK1A1P48729 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
CSNK1A1P48729 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CSNK1A1P48729 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CSNK1A1P48729 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC13.31□□□□□ -0.28
CSNK1A1P48729 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CSNK1A1P48729 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CSNK1A1P48729 SALL4P5-201ENST00000419001 1760 ntBASIC13.31□□□□□ -0.28
CSNK1A1P48729 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CSNK1A1P48729 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CSNK1A1P48729 AC005229.1-201ENST00000392885 409 ntBASIC13.31□□□□□ -0.28
CSNK1A1P48729 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC13.31□□□□□ -0.28
CSNK1A1P48729 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CSNK1A1P48729 AL035633.1-201ENST00000406139 838 ntBASIC13.31□□□□□ -0.28
CSNK1A1P48729 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC13.31□□□□□ -0.28
CSNK1A1P48729 TLE1P1-201ENST00000422965 589 ntBASIC13.31□□□□□ -0.28
CSNK1A1P48729 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC13.31□□□□□ -0.28
CSNK1A1P48729 C2orf27AP3-201ENST00000434123 579 ntBASIC13.31□□□□□ -0.28
CSNK1A1P48729 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC13.31□□□□□ -0.28
CSNK1A1P48729 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC13.31□□□□□ -0.28
CSNK1A1P48729 SLC25A47P1-201ENST00000531577 414 ntBASIC13.31□□□□□ -0.28
CSNK1A1P48729 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC13.31□□□□□ -0.28
CSNK1A1P48729 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CSNK1A1P48729 AC132938.2-201ENST00000579188 680 ntBASIC13.31□□□□□ -0.28
CSNK1A1P48729 RN7SL48P-201ENST00000579283 293 ntBASIC13.31□□□□□ -0.28
CSNK1A1P48729 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
CSNK1A1P48729 AC008735.3-201ENST00000596646 500 ntBASIC13.31□□□□□ -0.28
CSNK1A1P48729 AC233724.13-201ENST00000598383 410 ntBASIC13.31□□□□□ -0.28
CSNK1A1P48729 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC13.31□□□□□ -0.28
CSNK1A1P48729 AL022328.1-201ENST00000610050 478 ntBASIC13.31□□□□□ -0.28
CSNK1A1P48729 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC13.31□□□□□ -0.28
CSNK1A1P48729 AL354718.3-201ENST00000616414 581 ntBASIC13.31□□□□□ -0.28
CSNK1A1P48729 ENPP7P14-201ENST00000621765 1040 ntBASIC13.31□□□□□ -0.28
CSNK1A1P48729 CR382287.1-201ENST00000623954 586 ntBASIC13.31□□□□□ -0.28
CSNK1A1P48729 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CSNK1A1P48729 AL591163.1-201ENST00000641757 987 ntBASIC13.31□□□□□ -0.28
CSNK1A1P48729 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CSNK1A1P48729 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CSNK1A1P48729 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC13.31□□□□□ -0.28
CSNK1A1P48729 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC13.31□□□□□ -0.28
CSNK1A1P48729 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC13.31□□□□□ -0.28
CSNK1A1P48729 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CSNK1A1P48729 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
CSNK1A1P48729 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
CSNK1A1P48729 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC13.31□□□□□ -0.28
CSNK1A1P48729 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CSNK1A1P48729 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC13.31□□□□□ -0.28
CSNK1A1P48729 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CSNK1A1P48729 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CSNK1A1P48729 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC13.3□□□□□ -0.28
CSNK1A1P48729 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CSNK1A1P48729 LINC00552-201ENST00000625151 2579 ntBASIC13.3□□□□□ -0.28
CSNK1A1P48729 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
CSNK1A1P48729 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CSNK1A1P48729 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC13.3□□□□□ -0.28
CSNK1A1P48729 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CSNK1A1P48729 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CSNK1A1P48729 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CSNK1A1P48729 COCH-203ENST00000460581 2688 ntTSL 2 BASIC13.3□□□□□ -0.28
CSNK1A1P48729 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CSNK1A1P48729 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
CSNK1A1P48729 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC13.3□□□□□ -0.28
CSNK1A1P48729 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
CSNK1A1P48729 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
CSNK1A1P48729 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC13.3□□□□□ -0.28
CSNK1A1P48729 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC13.3□□□□□ -0.28
CSNK1A1P48729 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CSNK1A1P48729 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
CSNK1A1P48729 TPM3P8-201ENST00000330554 643 ntBASIC13.3□□□□□ -0.28
CSNK1A1P48729 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CSNK1A1P48729 COX5BP8-201ENST00000416911 349 ntBASIC13.3□□□□□ -0.28
CSNK1A1P48729 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC13.3□□□□□ -0.28
CSNK1A1P48729 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CSNK1A1P48729 BCRP2-202ENST00000447763 634 ntBASIC13.3□□□□□ -0.28
CSNK1A1P48729 COX20P2-201ENST00000452636 358 ntBASIC13.3□□□□□ -0.28
CSNK1A1P48729 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC13.3□□□□□ -0.28
CSNK1A1P48729 BCRP6-201ENST00000510112 632 ntBASIC13.3□□□□□ -0.28
CSNK1A1P48729 BCRP7-201ENST00000511549 544 ntBASIC13.3□□□□□ -0.28
CSNK1A1P48729 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
CSNK1A1P48729 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
CSNK1A1P48729 FUZ-207ENST00000526575 482 ntTSL 4 BASIC13.3□□□□□ -0.28
CSNK1A1P48729 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
CSNK1A1P48729 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC13.3□□□□□ -0.28
CSNK1A1P48729 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC13.3□□□□□ -0.28
CSNK1A1P48729 AC004466.1-201ENST00000599515 1080 ntBASIC13.3□□□□□ -0.28
CSNK1A1P48729 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CSNK1A1P48729 IGHV3-72-202ENST00000621503 303 ntBASIC13.3□□□□□ -0.28
CSNK1A1P48729 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC13.3□□□□□ -0.28
CSNK1A1P48729 AC105233.6-201ENST00000642093 218 ntBASIC13.3□□□□□ -0.28
CSNK1A1P48729 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC13.3□□□□□ -0.28
CSNK1A1P48729 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
CSNK1A1P48729 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC13.3□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 70.6 ms