Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RFX1P22670 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
RFX1P22670 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RFX1P22670 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
RFX1P22670 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
RFX1P22670 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RFX1P22670 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC16.26■□□□□ 0.19
RFX1P22670 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
RFX1P22670 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC16.26■□□□□ 0.19
RFX1P22670 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RFX1P22670 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RFX1P22670 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RFX1P22670 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
RFX1P22670 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RFX1P22670 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC16.26■□□□□ 0.19
RFX1P22670 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RFX1P22670 BAATP1-201ENST00000412284 1225 ntBASIC16.26■□□□□ 0.19
RFX1P22670 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
RFX1P22670 AC006033.1-201ENST00000440505 426 ntBASIC16.26■□□□□ 0.19
RFX1P22670 IGHJ2P-201ENST00000454480 60 ntBASIC16.26■□□□□ 0.19
RFX1P22670 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC16.26■□□□□ 0.19
RFX1P22670 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC16.26■□□□□ 0.19
RFX1P22670 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC16.26■□□□□ 0.19
RFX1P22670 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC16.26■□□□□ 0.19
RFX1P22670 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RFX1P22670 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC16.26■□□□□ 0.19
RFX1P22670 METTL26-214ENST00000614890 801 ntTSL 3 BASIC16.26■□□□□ 0.19
RFX1P22670 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC16.26■□□□□ 0.19
RFX1P22670 RHOXF1P1-202ENST00000635473 501 ntBASIC16.26■□□□□ 0.19
RFX1P22670 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
RFX1P22670 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC16.26■□□□□ 0.19
RFX1P22670 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
RFX1P22670 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
RFX1P22670 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
RFX1P22670 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RFX1P22670 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
RFX1P22670 TP73-213ENST00000604479 1623 ntTSL 5 BASIC16.26■□□□□ 0.19
RFX1P22670 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC16.26■□□□□ 0.19
RFX1P22670 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RFX1P22670 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC16.26■□□□□ 0.19
RFX1P22670 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC16.26■□□□□ 0.19
RFX1P22670 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RFX1P22670 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
RFX1P22670 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC16.26■□□□□ 0.19
RFX1P22670 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
RFX1P22670 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RFX1P22670 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC16.26■□□□□ 0.19
RFX1P22670 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
RFX1P22670 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RFX1P22670 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
RFX1P22670 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
RFX1P22670 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC16.25■□□□□ 0.19
RFX1P22670 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
RFX1P22670 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
RFX1P22670 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
RFX1P22670 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC16.25■□□□□ 0.19
RFX1P22670 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
RFX1P22670 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
RFX1P22670 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RFX1P22670 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RFX1P22670 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RFX1P22670 ACKR1-201ENST00000368121 1240 ntBASIC16.25■□□□□ 0.19
RFX1P22670 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC16.25■□□□□ 0.19
RFX1P22670 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC16.25■□□□□ 0.19
RFX1P22670 AGER-203ENST00000375065 665 ntTSL 2 BASIC16.25■□□□□ 0.19
RFX1P22670 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
RFX1P22670 ACTBP8-201ENST00000403258 1108 ntBASIC16.25■□□□□ 0.19
RFX1P22670 KLF2P2-201ENST00000416807 1039 ntBASIC16.25■□□□□ 0.19
RFX1P22670 TLE1P1-201ENST00000422965 589 ntBASIC16.25■□□□□ 0.19
RFX1P22670 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RFX1P22670 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC16.25■□□□□ 0.19
RFX1P22670 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC16.25■□□□□ 0.19
RFX1P22670 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC16.25■□□□□ 0.19
RFX1P22670 AC023310.1-201ENST00000554836 735 ntBASIC16.25■□□□□ 0.19
RFX1P22670 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC16.25■□□□□ 0.19
RFX1P22670 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC16.25■□□□□ 0.19
RFX1P22670 ABBA01031663.1-201ENST00000635630 790 ntBASIC16.25■□□□□ 0.19
RFX1P22670 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RFX1P22670 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
RFX1P22670 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC16.25■□□□□ 0.19
RFX1P22670 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RFX1P22670 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RFX1P22670 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RFX1P22670 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
RFX1P22670 BX640514.1-201ENST00000583223 1918 ntBASIC16.25■□□□□ 0.19
RFX1P22670 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
RFX1P22670 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC16.25■□□□□ 0.19
RFX1P22670 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RFX1P22670 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RFX1P22670 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC16.24■□□□□ 0.19
RFX1P22670 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RFX1P22670 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC16.24■□□□□ 0.19
RFX1P22670 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
RFX1P22670 CMIP-202ENST00000537098 4357 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RFX1P22670 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RFX1P22670 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RFX1P22670 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RFX1P22670 TICRR-201ENST00000268138 6775 ntAPPRIS P3 TSL 5 BASIC16.24■□□□□ 0.19
RFX1P22670 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RFX1P22670 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms