Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
CCL1P22362 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC12.81□□□□□ -0.36
CCL1P22362 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CCL1P22362 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
CCL1P22362 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
CCL1P22362 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
CCL1P22362 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
CCL1P22362 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CCL1P22362 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CCL1P22362 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
CCL1P22362 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CCL1P22362 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC12.8□□□□□ -0.36
CCL1P22362 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CCL1P22362 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CCL1P22362 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CCL1P22362 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
CCL1P22362 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CCL1P22362 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
CCL1P22362 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CCL1P22362 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
CCL1P22362 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC12.8□□□□□ -0.36
CCL1P22362 AL161772.1-201ENST00000610494 4412 ntBASIC12.8□□□□□ -0.36
CCL1P22362 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
CCL1P22362 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CCL1P22362 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CCL1P22362 AC011498.7-201ENST00000624986 2027 ntBASIC12.8□□□□□ -0.36
CCL1P22362 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CCL1P22362 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CCL1P22362 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CCL1P22362 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC12.8□□□□□ -0.36
CCL1P22362 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC12.8□□□□□ -0.36
CCL1P22362 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CCL1P22362 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
CCL1P22362 MIR770-201ENST00000390219 98 ntBASIC12.8□□□□□ -0.36
CCL1P22362 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CCL1P22362 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC12.8□□□□□ -0.36
CCL1P22362 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC12.8□□□□□ -0.36
CCL1P22362 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC12.8□□□□□ -0.36
CCL1P22362 AC012441.1-201ENST00000446669 685 ntBASIC12.8□□□□□ -0.36
CCL1P22362 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC12.8□□□□□ -0.36
CCL1P22362 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC12.8□□□□□ -0.36
CCL1P22362 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CCL1P22362 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CCL1P22362 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CCL1P22362 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CCL1P22362 SORD2P-201ENST00000558556 1069 ntBASIC12.8□□□□□ -0.36
CCL1P22362 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC12.8□□□□□ -0.36
CCL1P22362 AC140912.1-201ENST00000577171 1054 ntBASIC12.8□□□□□ -0.36
CCL1P22362 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC12.8□□□□□ -0.36
CCL1P22362 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC12.8□□□□□ -0.36
CCL1P22362 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
CCL1P22362 GPALPP1-207ENST00000611650 899 ntBASIC12.8□□□□□ -0.36
CCL1P22362 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC12.8□□□□□ -0.36
CCL1P22362 POLL-206ENST00000370172 2308 ntTSL 2 BASIC12.8□□□□□ -0.36
CCL1P22362 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CCL1P22362 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CCL1P22362 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
CCL1P22362 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
CCL1P22362 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC12.8□□□□□ -0.36
CCL1P22362 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC12.8□□□□□ -0.36
CCL1P22362 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CCL1P22362 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CCL1P22362 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CCL1P22362 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CCL1P22362 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CCL1P22362 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
CCL1P22362 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CCL1P22362 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CCL1P22362 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
CCL1P22362 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CCL1P22362 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CCL1P22362 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
CCL1P22362 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC12.8□□□□□ -0.36
CCL1P22362 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CCL1P22362 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC12.8□□□□□ -0.36
CCL1P22362 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CCL1P22362 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
CCL1P22362 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC12.8□□□□□ -0.36
CCL1P22362 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
CCL1P22362 AP000593.2-201ENST00000542775 1433 ntBASIC12.79□□□□□ -0.36
CCL1P22362 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CCL1P22362 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
CCL1P22362 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CCL1P22362 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC12.79□□□□□ -0.36
CCL1P22362 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC12.79□□□□□ -0.36
CCL1P22362 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
CCL1P22362 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
CCL1P22362 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CCL1P22362 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CCL1P22362 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC12.79□□□□□ -0.36
CCL1P22362 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC12.79□□□□□ -0.36
CCL1P22362 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CCL1P22362 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC12.79□□□□□ -0.36
CCL1P22362 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CCL1P22362 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC12.79□□□□□ -0.36
CCL1P22362 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC12.79□□□□□ -0.36
CCL1P22362 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CCL1P22362 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CCL1P22362 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC12.79□□□□□ -0.36
CCL1P22362 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms