Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HOXC6P09630 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
HOXC6P09630 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
HOXC6P09630 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
HOXC6P09630 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
HOXC6P09630 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC16.64■□□□□ 0.25
HOXC6P09630 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HOXC6P09630 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
HOXC6P09630 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
HOXC6P09630 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HOXC6P09630 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
HOXC6P09630 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC16.64■□□□□ 0.25
HOXC6P09630 PPA2-204ENST00000354147 667 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
HOXC6P09630 RNA5SP359-201ENST00000364838 113 ntBASIC16.64■□□□□ 0.25
HOXC6P09630 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HOXC6P09630 GEMIN7-202ENST00000391951 716 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
HOXC6P09630 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC16.64■□□□□ 0.25
HOXC6P09630 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HOXC6P09630 MPC1L-201ENST00000423387 571 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
HOXC6P09630 AC097065.1-201ENST00000425737 517 ntBASIC16.64■□□□□ 0.25
HOXC6P09630 PPA2-205ENST00000432483 859 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
HOXC6P09630 AL365295.1-203ENST00000435322 566 ntTSL 4 BASIC16.64■□□□□ 0.25
HOXC6P09630 KRT18P66-201ENST00000452970 1269 ntBASIC16.64■□□□□ 0.25
HOXC6P09630 KLHDC8A-203ENST00000460687 1022 ntTSL 5 BASIC16.64■□□□□ 0.25
HOXC6P09630 RN7SL81P-201ENST00000493781 261 ntBASIC16.64■□□□□ 0.25
HOXC6P09630 RHEB-207ENST00000496004 744 ntTSL 2 BASIC16.64■□□□□ 0.25
HOXC6P09630 TMCO5B-205ENST00000530020 894 ntBASIC16.64■□□□□ 0.25
HOXC6P09630 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC16.64■□□□□ 0.25
HOXC6P09630 AC087392.5-201ENST00000612517 489 ntBASIC16.64■□□□□ 0.25
HOXC6P09630 AC025262.2-201ENST00000623975 1056 ntBASIC16.64■□□□□ 0.25
HOXC6P09630 CMC2-224ENST00000630396 481 ntTSL 5 BASIC16.64■□□□□ 0.25
HOXC6P09630 AP001184.1-201ENST00000637936 376 ntBASIC16.64■□□□□ 0.25
HOXC6P09630 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
HOXC6P09630 AC013726.1-201ENST00000563747 2285 ntBASIC16.64■□□□□ 0.25
HOXC6P09630 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
HOXC6P09630 AC022532.1-201ENST00000624563 1728 ntBASIC16.64■□□□□ 0.25
HOXC6P09630 CHCHD7-202ENST00000355315 1535 ntTSL 2 BASIC16.64■□□□□ 0.25
HOXC6P09630 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC16.64■□□□□ 0.25
HOXC6P09630 AC126365.1-201ENST00000578585 1514 ntBASIC16.64■□□□□ 0.25
HOXC6P09630 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
HOXC6P09630 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
HOXC6P09630 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
HOXC6P09630 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HOXC6P09630 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HOXC6P09630 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
HOXC6P09630 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC16.64■□□□□ 0.25
HOXC6P09630 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
HOXC6P09630 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
HOXC6P09630 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC16.64■□□□□ 0.25
HOXC6P09630 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HOXC6P09630 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC16.63■□□□□ 0.25
HOXC6P09630 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
HOXC6P09630 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
HOXC6P09630 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HOXC6P09630 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
HOXC6P09630 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC16.63■□□□□ 0.25
HOXC6P09630 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HOXC6P09630 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC16.63■□□□□ 0.25
HOXC6P09630 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC16.63■□□□□ 0.25
HOXC6P09630 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
HOXC6P09630 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
HOXC6P09630 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HOXC6P09630 PIGL-201ENST00000225609 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HOXC6P09630 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
HOXC6P09630 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC16.63■□□□□ 0.25
HOXC6P09630 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
HOXC6P09630 OR2R1P-201ENST00000441404 914 ntBASIC16.63■□□□□ 0.25
HOXC6P09630 PGAP2-212ENST00000464906 1259 ntTSL 2 BASIC16.63■□□□□ 0.25
HOXC6P09630 GLYCTK-204ENST00000471180 992 ntTSL 2 BASIC16.63■□□□□ 0.25
HOXC6P09630 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC16.63■□□□□ 0.25
HOXC6P09630 AQP8-202ENST00000566125 1276 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
HOXC6P09630 PLIN5-202ENST00000586133 907 ntTSL 3 BASIC16.63■□□□□ 0.25
HOXC6P09630 AC011472.1-201ENST00000588634 569 ntTSL 4 BASIC16.63■□□□□ 0.25
HOXC6P09630 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
HOXC6P09630 SRSF3-208ENST00000620941 869 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
HOXC6P09630 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
HOXC6P09630 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
HOXC6P09630 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
HOXC6P09630 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HOXC6P09630 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC16.63■□□□□ 0.25
HOXC6P09630 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HOXC6P09630 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
HOXC6P09630 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HOXC6P09630 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC16.63■□□□□ 0.25
HOXC6P09630 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
HOXC6P09630 AC005726.3-202ENST00000577814 1316 ntTSL 3 BASIC16.63■□□□□ 0.25
HOXC6P09630 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
HOXC6P09630 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
HOXC6P09630 REXO1L2P-201ENST00000425429 2069 ntBASIC16.63■□□□□ 0.25
HOXC6P09630 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HOXC6P09630 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HOXC6P09630 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC16.63■□□□□ 0.25
HOXC6P09630 AC092384.3-202ENST00000564646 2873 ntBASIC16.63■□□□□ 0.25
HOXC6P09630 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
HOXC6P09630 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
HOXC6P09630 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HOXC6P09630 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
HOXC6P09630 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
HOXC6P09630 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HOXC6P09630 AC023024.2-201ENST00000623561 1993 ntBASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms