Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC10.49□□□□□ -0.73
LINC01546A6NGU7 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC10.49□□□□□ -0.73
LINC01546A6NGU7 CD63-204ENST00000546939 779 ntTSL 3 BASIC10.49□□□□□ -0.73
LINC01546A6NGU7 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
LINC01546A6NGU7 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC10.49□□□□□ -0.73
LINC01546A6NGU7 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC10.49□□□□□ -0.73
LINC01546A6NGU7 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC10.49□□□□□ -0.73
LINC01546A6NGU7 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC10.49□□□□□ -0.73
LINC01546A6NGU7 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
LINC01546A6NGU7 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC10.49□□□□□ -0.73
LINC01546A6NGU7 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
LINC01546A6NGU7 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
LINC01546A6NGU7 AC055717.3-201ENST00000622967 595 ntBASIC10.49□□□□□ -0.73
LINC01546A6NGU7 AC116407.3-201ENST00000623905 1129 ntBASIC10.49□□□□□ -0.73
LINC01546A6NGU7 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC10.49□□□□□ -0.73
LINC01546A6NGU7 LINC00628-201ENST00000628516 1289 ntBASIC10.49□□□□□ -0.73
LINC01546A6NGU7 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC10.49□□□□□ -0.73
LINC01546A6NGU7 FUBP1-203ENST00000370768 2378 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
LINC01546A6NGU7 ABCB7-203ENST00000373394 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC10.49□□□□□ -0.73
LINC01546A6NGU7 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC10.49□□□□□ -0.73
LINC01546A6NGU7 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC10.49□□□□□ -0.73
LINC01546A6NGU7 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
LINC01546A6NGU7 PCID2-205ENST00000375477 1654 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
LINC01546A6NGU7 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
LINC01546A6NGU7 ZNF426-204ENST00000593003 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
LINC01546A6NGU7 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
LINC01546A6NGU7 LRRFIP2-202ENST00000354379 2821 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
LINC01546A6NGU7 TUBB3P1-201ENST00000405796 1332 ntBASIC10.49□□□□□ -0.73
LINC01546A6NGU7 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
LINC01546A6NGU7 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
LINC01546A6NGU7 FAM212B-AS1-201ENST00000430373 2131 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
LINC01546A6NGU7 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
LINC01546A6NGU7 CAMKV-215ENST00000488336 2905 ntTSL 2 BASIC10.49□□□□□ -0.73
LINC01546A6NGU7 KAT7-204ENST00000454930 1774 ntTSL 2 BASIC10.49□□□□□ -0.73
LINC01546A6NGU7 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC10.49□□□□□ -0.73
LINC01546A6NGU7 SPACA9-202ENST00000356311 2243 ntTSL 2 BASIC10.49□□□□□ -0.73
LINC01546A6NGU7 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
LINC01546A6NGU7 SECISBP2-202ENST00000375807 3462 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
LINC01546A6NGU7 FIBCD1-204ENST00000448616 3119 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
LINC01546A6NGU7 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC10.49□□□□□ -0.73
LINC01546A6NGU7 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
LINC01546A6NGU7 AL365181.3-201ENST00000605886 3222 ntBASIC10.48□□□□□ -0.73
LINC01546A6NGU7 ZFP36L2-201ENST00000282388 3696 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
LINC01546A6NGU7 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
LINC01546A6NGU7 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
LINC01546A6NGU7 IFT172-203ENST00000416524 1982 ntTSL 2 BASIC10.48□□□□□ -0.73
LINC01546A6NGU7 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC10.48□□□□□ -0.73
LINC01546A6NGU7 ASAP3-202ENST00000437606 2865 ntAPPRIS ALT2 TSL 2 BASIC10.48□□□□□ -0.73
LINC01546A6NGU7 ERVK13-1-207ENST00000569465 3321 ntTSL 2 BASIC10.48□□□□□ -0.73
LINC01546A6NGU7 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
LINC01546A6NGU7 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
LINC01546A6NGU7 GUCY1B3-205ENST00000505764 2456 ntTSL 2 BASIC10.48□□□□□ -0.73
LINC01546A6NGU7 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC10.48□□□□□ -0.73
LINC01546A6NGU7 AC015921.1-201ENST00000574885 2546 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
LINC01546A6NGU7 IL10-202ENST00000423557 1630 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
LINC01546A6NGU7 LINC01165-201ENST00000445190 1623 ntBASIC10.48□□□□□ -0.73
LINC01546A6NGU7 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC10.48□□□□□ -0.73
LINC01546A6NGU7 MARK2-205ENST00000408948 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
LINC01546A6NGU7 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
LINC01546A6NGU7 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
LINC01546A6NGU7 ACADM-201ENST00000370834 2172 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
LINC01546A6NGU7 LIMD2-201ENST00000259006 3193 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
LINC01546A6NGU7 ASB3-204ENST00000406687 2205 ntTSL 2 BASIC10.48□□□□□ -0.73
LINC01546A6NGU7 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
LINC01546A6NGU7 SALL4P5-201ENST00000419001 1760 ntBASIC10.48□□□□□ -0.73
LINC01546A6NGU7 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
LINC01546A6NGU7 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
LINC01546A6NGU7 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
LINC01546A6NGU7 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
LINC01546A6NGU7 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
LINC01546A6NGU7 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
LINC01546A6NGU7 AC004832.2-201ENST00000426397 482 ntBASIC10.48□□□□□ -0.73
LINC01546A6NGU7 AC007969.1-201ENST00000433675 447 ntBASIC10.48□□□□□ -0.73
LINC01546A6NGU7 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC10.48□□□□□ -0.73
LINC01546A6NGU7 AK2P2-201ENST00000439142 405 ntBASIC10.48□□□□□ -0.73
LINC01546A6NGU7 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC10.48□□□□□ -0.73
LINC01546A6NGU7 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC10.48□□□□□ -0.73
LINC01546A6NGU7 AC079140.1-201ENST00000508039 487 ntBASIC10.48□□□□□ -0.73
LINC01546A6NGU7 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC10.48□□□□□ -0.73
LINC01546A6NGU7 AC131206.1-201ENST00000538078 1211 ntBASIC10.48□□□□□ -0.73
LINC01546A6NGU7 AC103988.2-201ENST00000561804 725 ntBASIC10.48□□□□□ -0.73
LINC01546A6NGU7 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC10.48□□□□□ -0.73
LINC01546A6NGU7 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC10.48□□□□□ -0.73
LINC01546A6NGU7 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
LINC01546A6NGU7 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC10.48□□□□□ -0.73
LINC01546A6NGU7 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
LINC01546A6NGU7 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC10.48□□□□□ -0.73
LINC01546A6NGU7 RN7SL828P-201ENST00000607615 303 ntBASIC10.48□□□□□ -0.73
LINC01546A6NGU7 AC064836.3-201ENST00000607928 673 ntBASIC10.48□□□□□ -0.73
LINC01546A6NGU7 AC018529.1-201ENST00000613063 361 ntBASIC10.48□□□□□ -0.73
LINC01546A6NGU7 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC10.48□□□□□ -0.73
LINC01546A6NGU7 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC10.48□□□□□ -0.73
LINC01546A6NGU7 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC10.48□□□□□ -0.73
LINC01546A6NGU7 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
LINC01546A6NGU7 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
LINC01546A6NGU7 LINC01833-203ENST00000437916 2880 ntTSL 3 BASIC10.48□□□□□ -0.73
LINC01546A6NGU7 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC10.48□□□□□ -0.73
LINC01546A6NGU7 Z97192.2-201ENST00000393264 2379 ntTSL 2 BASIC10.48□□□□□ -0.73
LINC01546A6NGU7 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
LINC01546A6NGU7 AL035456.1-201ENST00000456064 1369 ntBASIC10.48□□□□□ -0.73
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms