Protein–RNA interactions for Protein: Q9Y5E1

PCDHB9, Protocadherin beta-9, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9Q9Y5E1 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC23.26■■□□□ 1.31
PCDHB9Q9Y5E1 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC23.26■■□□□ 1.31
PCDHB9Q9Y5E1 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC23.26■■□□□ 1.31
PCDHB9Q9Y5E1 AC131274.2-201ENST00000580697 1507 ntBASIC23.26■■□□□ 1.31
PCDHB9Q9Y5E1 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC23.26■■□□□ 1.31
PCDHB9Q9Y5E1 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
PCDHB9Q9Y5E1 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC23.26■■□□□ 1.31
PCDHB9Q9Y5E1 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC23.26■■□□□ 1.31
PCDHB9Q9Y5E1 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
PCDHB9Q9Y5E1 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC23.25■■□□□ 1.31
PCDHB9Q9Y5E1 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC23.25■■□□□ 1.31
PCDHB9Q9Y5E1 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
PCDHB9Q9Y5E1 LINC01124-201ENST00000409786 2117 ntBASIC23.25■■□□□ 1.31
PCDHB9Q9Y5E1 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC23.25■■□□□ 1.31
PCDHB9Q9Y5E1 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC23.25■■□□□ 1.31
PCDHB9Q9Y5E1 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
PCDHB9Q9Y5E1 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
PCDHB9Q9Y5E1 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC23.25■■□□□ 1.31
PCDHB9Q9Y5E1 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC23.24■■□□□ 1.31
PCDHB9Q9Y5E1 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC23.24■■□□□ 1.31
PCDHB9Q9Y5E1 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC23.24■■□□□ 1.31
PCDHB9Q9Y5E1 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
PCDHB9Q9Y5E1 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC23.24■■□□□ 1.31
PCDHB9Q9Y5E1 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
PCDHB9Q9Y5E1 AL022069.1-201ENST00000568025 1636 ntBASIC23.24■■□□□ 1.31
PCDHB9Q9Y5E1 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC23.24■■□□□ 1.31
PCDHB9Q9Y5E1 AC133561.4-201ENST00000566112 224 ntBASIC23.24■■□□□ 1.31
PCDHB9Q9Y5E1 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC23.24■■□□□ 1.31
PCDHB9Q9Y5E1 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
PCDHB9Q9Y5E1 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC23.24■■□□□ 1.31
PCDHB9Q9Y5E1 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC23.24■■□□□ 1.31
PCDHB9Q9Y5E1 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC23.23■■□□□ 1.31
PCDHB9Q9Y5E1 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC23.23■■□□□ 1.31
PCDHB9Q9Y5E1 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC23.23■■□□□ 1.31
PCDHB9Q9Y5E1 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
PCDHB9Q9Y5E1 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
PCDHB9Q9Y5E1 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
PCDHB9Q9Y5E1 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
PCDHB9Q9Y5E1 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC23.22■■□□□ 1.31
PCDHB9Q9Y5E1 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC23.22■■□□□ 1.31
PCDHB9Q9Y5E1 CLTA-210ENST00000540080 989 ntTSL 2 BASIC23.22■■□□□ 1.31
PCDHB9Q9Y5E1 SNX5-217ENST00000606557 1087 ntBASIC23.22■■□□□ 1.31
PCDHB9Q9Y5E1 EXOG-217ENST00000630638 197 ntTSL 5 BASIC23.22■■□□□ 1.31
PCDHB9Q9Y5E1 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC23.22■■□□□ 1.31
PCDHB9Q9Y5E1 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
PCDHB9Q9Y5E1 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC23.22■■□□□ 1.31
PCDHB9Q9Y5E1 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC23.22■■□□□ 1.31
PCDHB9Q9Y5E1 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
PCDHB9Q9Y5E1 LSM4-201ENST00000252816 986 ntTSL 2 BASIC23.21■■□□□ 1.31
PCDHB9Q9Y5E1 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC23.21■■□□□ 1.31
PCDHB9Q9Y5E1 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC23.21■■□□□ 1.31
PCDHB9Q9Y5E1 STK32C-205ENST00000456004 607 ntTSL 2 BASIC23.21■■□□□ 1.31
PCDHB9Q9Y5E1 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC23.21■■□□□ 1.31
PCDHB9Q9Y5E1 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
PCDHB9Q9Y5E1 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
PCDHB9Q9Y5E1 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
PCDHB9Q9Y5E1 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
PCDHB9Q9Y5E1 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC23.21■■□□□ 1.31
PCDHB9Q9Y5E1 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC23.2■■□□□ 1.3
PCDHB9Q9Y5E1 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC23.2■■□□□ 1.3
PCDHB9Q9Y5E1 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC23.2■■□□□ 1.3
PCDHB9Q9Y5E1 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
PCDHB9Q9Y5E1 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC23.2■■□□□ 1.3
PCDHB9Q9Y5E1 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC23.2■■□□□ 1.3
PCDHB9Q9Y5E1 AC004448.1-201ENST00000458332 883 ntBASIC23.2■■□□□ 1.3
PCDHB9Q9Y5E1 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC23.2■■□□□ 1.3
PCDHB9Q9Y5E1 MIR4466-201ENST00000606121 54 ntBASIC23.2■■□□□ 1.3
PCDHB9Q9Y5E1 AC092666.2-201ENST00000613287 246 ntBASIC23.2■■□□□ 1.3
PCDHB9Q9Y5E1 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
PCDHB9Q9Y5E1 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC23.2■■□□□ 1.3
PCDHB9Q9Y5E1 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
PCDHB9Q9Y5E1 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
PCDHB9Q9Y5E1 GUK1-205ENST00000366722 850 ntTSL 3 BASIC23.19■■□□□ 1.3
PCDHB9Q9Y5E1 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC23.19■■□□□ 1.3
PCDHB9Q9Y5E1 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC23.19■■□□□ 1.3
PCDHB9Q9Y5E1 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC23.19■■□□□ 1.3
PCDHB9Q9Y5E1 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
PCDHB9Q9Y5E1 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC23.18■■□□□ 1.3
PCDHB9Q9Y5E1 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC23.18■■□□□ 1.3
PCDHB9Q9Y5E1 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC23.18■■□□□ 1.3
PCDHB9Q9Y5E1 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
PCDHB9Q9Y5E1 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
PCDHB9Q9Y5E1 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
PCDHB9Q9Y5E1 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
PCDHB9Q9Y5E1 CD37-213ENST00000598095 1598 ntTSL 2 BASIC23.18■■□□□ 1.3
PCDHB9Q9Y5E1 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC23.17■■□□□ 1.3
PCDHB9Q9Y5E1 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
PCDHB9Q9Y5E1 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC23.17■■□□□ 1.3
PCDHB9Q9Y5E1 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
PCDHB9Q9Y5E1 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
PCDHB9Q9Y5E1 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
PCDHB9Q9Y5E1 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC23.17■■□□□ 1.3
PCDHB9Q9Y5E1 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
PCDHB9Q9Y5E1 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
PCDHB9Q9Y5E1 LINC00543-201ENST00000567234 1845 ntBASIC23.17■■□□□ 1.3
PCDHB9Q9Y5E1 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC23.17■■□□□ 1.3
PCDHB9Q9Y5E1 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
PCDHB9Q9Y5E1 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
PCDHB9Q9Y5E1 PREB-202ENST00000406567 1910 ntTSL 5 BASIC23.16■■□□□ 1.3
PCDHB9Q9Y5E1 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms