Protein–RNA interactions for Protein: Q9UK80

USP21, Ubiquitin carboxyl-terminal hydrolase 21, humanhuman

Predictions only

Length 565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP21Q9UK80 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC30.9■■■□□ 2.54
USP21Q9UK80 RAP2CP1-201ENST00000605103 478 ntBASIC30.9■■■□□ 2.54
USP21Q9UK80 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
USP21Q9UK80 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC30.9■■■□□ 2.54
USP21Q9UK80 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC30.9■■■□□ 2.54
USP21Q9UK80 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC30.9■■■□□ 2.54
USP21Q9UK80 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.54
USP21Q9UK80 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC30.89■■■□□ 2.54
USP21Q9UK80 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC30.89■■■□□ 2.54
USP21Q9UK80 AC012414.1-201ENST00000556676 535 ntBASIC30.89■■■□□ 2.54
USP21Q9UK80 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC30.89■■■□□ 2.54
USP21Q9UK80 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.53
USP21Q9UK80 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC30.89■■■□□ 2.53
USP21Q9UK80 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC30.88■■■□□ 2.53
USP21Q9UK80 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC30.88■■■□□ 2.53
USP21Q9UK80 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC30.88■■■□□ 2.53
USP21Q9UK80 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC30.88■■■□□ 2.53
USP21Q9UK80 AC009086.3-201ENST00000623486 1008 ntBASIC30.88■■■□□ 2.53
USP21Q9UK80 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC30.88■■■□□ 2.53
USP21Q9UK80 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
USP21Q9UK80 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
USP21Q9UK80 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC30.87■■■□□ 2.53
USP21Q9UK80 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC30.87■■■□□ 2.53
USP21Q9UK80 AICDA-202ENST00000537228 667 ntTSL 5 BASIC30.87■■■□□ 2.53
USP21Q9UK80 AC104771.1-201ENST00000603335 964 ntBASIC30.87■■■□□ 2.53
USP21Q9UK80 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC30.86■■■□□ 2.53
USP21Q9UK80 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC30.86■■■□□ 2.53
USP21Q9UK80 TERF1P2-201ENST00000583350 1212 ntBASIC30.86■■■□□ 2.53
USP21Q9UK80 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC30.86■■■□□ 2.53
USP21Q9UK80 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC30.86■■■□□ 2.53
USP21Q9UK80 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC30.85■■■□□ 2.53
USP21Q9UK80 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
USP21Q9UK80 AL354811.1-201ENST00000610286 706 ntBASIC30.85■■■□□ 2.53
USP21Q9UK80 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC30.84■■■□□ 2.53
USP21Q9UK80 MIR572-201ENST00000384983 95 ntBASIC30.84■■■□□ 2.53
USP21Q9UK80 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC30.84■■■□□ 2.53
USP21Q9UK80 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC30.84■■■□□ 2.53
USP21Q9UK80 CDCA4P2-201ENST00000441182 718 ntBASIC30.84■■■□□ 2.53
USP21Q9UK80 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC30.84■■■□□ 2.53
USP21Q9UK80 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC30.84■■■□□ 2.53
USP21Q9UK80 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC30.84■■■□□ 2.53
USP21Q9UK80 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC30.83■■■□□ 2.53
USP21Q9UK80 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC30.83■■■□□ 2.53
USP21Q9UK80 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC30.83■■■□□ 2.53
USP21Q9UK80 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC30.83■■■□□ 2.53
USP21Q9UK80 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
USP21Q9UK80 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC30.82■■■□□ 2.53
USP21Q9UK80 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC30.82■■■□□ 2.52
USP21Q9UK80 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
USP21Q9UK80 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC30.82■■■□□ 2.52
USP21Q9UK80 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC30.82■■■□□ 2.52
USP21Q9UK80 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC30.82■■■□□ 2.52
USP21Q9UK80 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC30.82■■■□□ 2.52
USP21Q9UK80 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
USP21Q9UK80 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC30.81■■■□□ 2.52
USP21Q9UK80 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC30.81■■■□□ 2.52
USP21Q9UK80 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC30.81■■■□□ 2.52
USP21Q9UK80 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC30.81■■■□□ 2.52
USP21Q9UK80 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
USP21Q9UK80 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC30.8■■■□□ 2.52
USP21Q9UK80 AC073111.5-205ENST00000641717 521 ntBASIC30.8■■■□□ 2.52
USP21Q9UK80 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC30.8■■■□□ 2.52
USP21Q9UK80 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC30.79■■■□□ 2.52
USP21Q9UK80 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC30.79■■■□□ 2.52
USP21Q9UK80 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
USP21Q9UK80 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC30.79■■■□□ 2.52
USP21Q9UK80 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC30.79■■■□□ 2.52
USP21Q9UK80 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
USP21Q9UK80 LINC02228-203ENST00000641970 1355 ntBASIC30.79■■■□□ 2.52
USP21Q9UK80 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC30.78■■■□□ 2.52
USP21Q9UK80 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC30.78■■■□□ 2.52
USP21Q9UK80 AL355802.2-201ENST00000402069 882 ntBASIC30.78■■■□□ 2.52
USP21Q9UK80 AC006015.1-201ENST00000429970 570 ntBASIC30.78■■■□□ 2.52
USP21Q9UK80 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC30.78■■■□□ 2.52
USP21Q9UK80 IGHV3-19-201ENST00000521488 291 ntBASIC30.78■■■□□ 2.52
USP21Q9UK80 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC30.78■■■□□ 2.52
USP21Q9UK80 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC30.78■■■□□ 2.52
USP21Q9UK80 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC30.78■■■□□ 2.52
USP21Q9UK80 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC30.78■■■□□ 2.52
USP21Q9UK80 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC30.78■■■□□ 2.52
USP21Q9UK80 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
USP21Q9UK80 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC30.77■■■□□ 2.52
USP21Q9UK80 MAP2K4P1-201ENST00000438453 1195 ntBASIC30.77■■■□□ 2.52
USP21Q9UK80 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC30.77■■■□□ 2.52
USP21Q9UK80 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC30.76■■■□□ 2.52
USP21Q9UK80 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC30.76■■■□□ 2.51
USP21Q9UK80 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC30.76■■■□□ 2.51
USP21Q9UK80 PPP1R14BP3-201ENST00000509033 445 ntBASIC30.76■■■□□ 2.51
USP21Q9UK80 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC30.76■■■□□ 2.51
USP21Q9UK80 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC30.76■■■□□ 2.51
USP21Q9UK80 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
USP21Q9UK80 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC30.76■■■□□ 2.51
USP21Q9UK80 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
USP21Q9UK80 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC30.75■■■□□ 2.51
USP21Q9UK80 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC30.75■■■□□ 2.51
USP21Q9UK80 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC30.75■■■□□ 2.51
USP21Q9UK80 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC30.75■■■□□ 2.51
USP21Q9UK80 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC30.74■■■□□ 2.51
USP21Q9UK80 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
USP21Q9UK80 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC30.74■■■□□ 2.51
Retrieved 100 of 98,524 protein–RNA pairs in 15.4 ms