Protein–RNA interactions for Protein: Q9NR96

TLR9, Toll-like receptor 9, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR9Q9NR96 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC24.45■■□□□ 1.5
TLR9Q9NR96 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
TLR9Q9NR96 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC24.45■■□□□ 1.5
TLR9Q9NR96 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC24.45■■□□□ 1.5
TLR9Q9NR96 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC24.45■■□□□ 1.5
TLR9Q9NR96 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC24.45■■□□□ 1.5
TLR9Q9NR96 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC24.45■■□□□ 1.5
TLR9Q9NR96 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
TLR9Q9NR96 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
TLR9Q9NR96 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
TLR9Q9NR96 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC24.44■■□□□ 1.5
TLR9Q9NR96 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC24.44■■□□□ 1.5
TLR9Q9NR96 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC24.44■■□□□ 1.5
TLR9Q9NR96 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
TLR9Q9NR96 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC24.44■■□□□ 1.5
TLR9Q9NR96 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
TLR9Q9NR96 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC24.43■■□□□ 1.5
TLR9Q9NR96 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
TLR9Q9NR96 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
TLR9Q9NR96 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC24.43■■□□□ 1.5
TLR9Q9NR96 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC24.43■■□□□ 1.5
TLR9Q9NR96 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
TLR9Q9NR96 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC24.42■■□□□ 1.5
TLR9Q9NR96 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
TLR9Q9NR96 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
TLR9Q9NR96 AC241377.3-202ENST00000626088 1088 ntBASIC24.42■■□□□ 1.5
TLR9Q9NR96 AC241585.3-202ENST00000628937 1088 ntBASIC24.42■■□□□ 1.5
TLR9Q9NR96 AC245100.8-202ENST00000629247 1058 ntBASIC24.42■■□□□ 1.5
TLR9Q9NR96 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
TLR9Q9NR96 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC24.41■■□□□ 1.5
TLR9Q9NR96 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC24.41■■□□□ 1.5
TLR9Q9NR96 C17orf82-201ENST00000623772 1530 ntBASIC24.41■■□□□ 1.5
TLR9Q9NR96 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
TLR9Q9NR96 HES6-206ENST00000409574 738 ntTSL 2 BASIC24.41■■□□□ 1.5
TLR9Q9NR96 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
TLR9Q9NR96 RHOF-204ENST00000537265 699 ntTSL 2 BASIC24.41■■□□□ 1.5
TLR9Q9NR96 AC136469.2-201ENST00000623944 1028 ntBASIC24.41■■□□□ 1.5
TLR9Q9NR96 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
TLR9Q9NR96 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC24.41■■□□□ 1.5
TLR9Q9NR96 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC24.41■■□□□ 1.5
TLR9Q9NR96 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
TLR9Q9NR96 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
TLR9Q9NR96 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC24.4■■□□□ 1.5
TLR9Q9NR96 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC24.4■■□□□ 1.5
TLR9Q9NR96 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
TLR9Q9NR96 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
TLR9Q9NR96 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
TLR9Q9NR96 AL022069.1-201ENST00000568025 1636 ntBASIC24.39■■□□□ 1.5
TLR9Q9NR96 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC24.39■■□□□ 1.5
TLR9Q9NR96 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC24.39■■□□□ 1.5
TLR9Q9NR96 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC24.39■■□□□ 1.5
TLR9Q9NR96 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
TLR9Q9NR96 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
TLR9Q9NR96 JTB-203ENST00000368589 1216 ntTSL 2 BASIC24.39■■□□□ 1.49
TLR9Q9NR96 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC24.39■■□□□ 1.49
TLR9Q9NR96 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
TLR9Q9NR96 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
TLR9Q9NR96 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC24.39■■□□□ 1.49
TLR9Q9NR96 AC092803.2-201ENST00000564287 1899 ntBASIC24.38■■□□□ 1.49
TLR9Q9NR96 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
TLR9Q9NR96 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
TLR9Q9NR96 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC24.38■■□□□ 1.49
TLR9Q9NR96 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC24.38■■□□□ 1.49
TLR9Q9NR96 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC24.38■■□□□ 1.49
TLR9Q9NR96 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC24.38■■□□□ 1.49
TLR9Q9NR96 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC24.38■■□□□ 1.49
TLR9Q9NR96 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC24.38■■□□□ 1.49
TLR9Q9NR96 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
TLR9Q9NR96 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
TLR9Q9NR96 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
TLR9Q9NR96 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC24.37■■□□□ 1.49
TLR9Q9NR96 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC24.37■■□□□ 1.49
TLR9Q9NR96 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC24.37■■□□□ 1.49
TLR9Q9NR96 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
TLR9Q9NR96 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC24.37■■□□□ 1.49
TLR9Q9NR96 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC24.37■■□□□ 1.49
TLR9Q9NR96 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC24.37■■□□□ 1.49
TLR9Q9NR96 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
TLR9Q9NR96 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
TLR9Q9NR96 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
TLR9Q9NR96 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
TLR9Q9NR96 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
TLR9Q9NR96 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC24.36■■□□□ 1.49
TLR9Q9NR96 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC24.36■■□□□ 1.49
TLR9Q9NR96 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC24.36■■□□□ 1.49
TLR9Q9NR96 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
TLR9Q9NR96 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
TLR9Q9NR96 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC24.35■■□□□ 1.49
TLR9Q9NR96 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
TLR9Q9NR96 AC006455.2-201ENST00000429931 906 ntBASIC24.35■■□□□ 1.49
TLR9Q9NR96 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC24.35■■□□□ 1.49
TLR9Q9NR96 AC233992.3-201ENST00000607491 485 ntBASIC24.35■■□□□ 1.49
TLR9Q9NR96 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC24.35■■□□□ 1.49
TLR9Q9NR96 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC24.35■■□□□ 1.49
TLR9Q9NR96 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC24.35■■□□□ 1.49
TLR9Q9NR96 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC24.34■■□□□ 1.49
TLR9Q9NR96 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC24.34■■□□□ 1.49
TLR9Q9NR96 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
TLR9Q9NR96 MPST-208ENST00000628507 698 ntTSL 5 BASIC24.34■■□□□ 1.49
TLR9Q9NR96 SLC6A10P-202ENST00000431994 2058 ntBASIC24.34■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 15.6 ms