Protein–RNA interactions for Protein: Q99LC2

Cstf1, Cleavage stimulation factor subunit 1, mousemouse

Known RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf1Q99LC2 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Cstf1Q99LC2 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC20.55■□□□□ 0.88
Cstf1Q99LC2 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cstf1Q99LC2 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cstf1Q99LC2 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cstf1Q99LC2 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC20.55■□□□□ 0.88
Cstf1Q99LC2 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Cstf1Q99LC2 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cstf1Q99LC2 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cstf1Q99LC2 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cstf1Q99LC2 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Cstf1Q99LC2 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cstf1Q99LC2 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cstf1Q99LC2 CT025689.6-201ENSMUST00000224991 1104 ntBASIC20.54■□□□□ 0.88
Cstf1Q99LC2 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cstf1Q99LC2 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC20.54■□□□□ 0.88
Cstf1Q99LC2 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cstf1Q99LC2 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Cstf1Q99LC2 Gm20634-201ENSMUST00000090779 2956 ntBASIC20.54■□□□□ 0.88
Cstf1Q99LC2 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cstf1Q99LC2 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cstf1Q99LC2 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cstf1Q99LC2 Gm4430-201ENSMUST00000192413 1943 ntBASIC20.53■□□□□ 0.88
Cstf1Q99LC2 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cstf1Q99LC2 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cstf1Q99LC2 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cstf1Q99LC2 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Cstf1Q99LC2 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cstf1Q99LC2 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cstf1Q99LC2 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cstf1Q99LC2 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cstf1Q99LC2 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Cstf1Q99LC2 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Cstf1Q99LC2 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cstf1Q99LC2 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cstf1Q99LC2 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cstf1Q99LC2 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
Cstf1Q99LC2 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cstf1Q99LC2 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Cstf1Q99LC2 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Cstf1Q99LC2 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cstf1Q99LC2 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Cstf1Q99LC2 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cstf1Q99LC2 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Cstf1Q99LC2 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cstf1Q99LC2 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cstf1Q99LC2 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Cstf1Q99LC2 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cstf1Q99LC2 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cstf1Q99LC2 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cstf1Q99LC2 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cstf1Q99LC2 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cstf1Q99LC2 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC20.51■□□□□ 0.87
Cstf1Q99LC2 Gm6085-201ENSMUST00000182774 1470 ntBASIC20.5■□□□□ 0.87
Cstf1Q99LC2 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cstf1Q99LC2 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cstf1Q99LC2 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cstf1Q99LC2 Gm10849-201ENSMUST00000100397 618 ntBASIC20.5■□□□□ 0.87
Cstf1Q99LC2 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC20.5■□□□□ 0.87
Cstf1Q99LC2 Gm7143-201ENSMUST00000222811 859 ntBASIC20.5■□□□□ 0.87
Cstf1Q99LC2 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC20.5■□□□□ 0.87
Cstf1Q99LC2 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cstf1Q99LC2 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cstf1Q99LC2 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cstf1Q99LC2 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cstf1Q99LC2 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cstf1Q99LC2 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cstf1Q99LC2 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Cstf1Q99LC2 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Cstf1Q99LC2 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cstf1Q99LC2 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC20.49■□□□□ 0.87
Cstf1Q99LC2 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC20.49■□□□□ 0.87
Cstf1Q99LC2 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cstf1Q99LC2 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Cstf1Q99LC2 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cstf1Q99LC2 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC20.48■□□□□ 0.87
Cstf1Q99LC2 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC20.48■□□□□ 0.87
Cstf1Q99LC2 Gm40848-201ENSMUST00000221998 324 ntBASIC20.48■□□□□ 0.87
Cstf1Q99LC2 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cstf1Q99LC2 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC20.47■□□□□ 0.87
Cstf1Q99LC2 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cstf1Q99LC2 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cstf1Q99LC2 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC20.47■□□□□ 0.87
Cstf1Q99LC2 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC20.47■□□□□ 0.87
Cstf1Q99LC2 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Cstf1Q99LC2 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cstf1Q99LC2 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Cstf1Q99LC2 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cstf1Q99LC2 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cstf1Q99LC2 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Cstf1Q99LC2 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cstf1Q99LC2 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cstf1Q99LC2 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC20.46■□□□□ 0.87
Cstf1Q99LC2 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cstf1Q99LC2 Spcs1-204ENSMUST00000226782 949 ntBASIC20.46■□□□□ 0.87
Cstf1Q99LC2 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Cstf1Q99LC2 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cstf1Q99LC2 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Cstf1Q99LC2 Kdm3b-204ENSMUST00000224715 2032 ntBASIC20.45■□□□□ 0.86
Cstf1Q99LC2 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC20.45■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 106.6 ms