Protein–RNA interactions for Protein: Q8NCL8

TMEM116, Transmembrane protein 116, humanhuman

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116Q8NCL8 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
TMEM116Q8NCL8 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
TMEM116Q8NCL8 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TMEM116Q8NCL8 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TMEM116Q8NCL8 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
TMEM116Q8NCL8 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TMEM116Q8NCL8 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
TMEM116Q8NCL8 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
TMEM116Q8NCL8 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
TMEM116Q8NCL8 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
TMEM116Q8NCL8 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
TMEM116Q8NCL8 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TMEM116Q8NCL8 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
TMEM116Q8NCL8 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC18.01■□□□□ 0.47
TMEM116Q8NCL8 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
TMEM116Q8NCL8 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
TMEM116Q8NCL8 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
TMEM116Q8NCL8 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TMEM116Q8NCL8 CD37-213ENST00000598095 1598 ntTSL 2 BASIC18.01■□□□□ 0.47
TMEM116Q8NCL8 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TMEM116Q8NCL8 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC18.01■□□□□ 0.47
TMEM116Q8NCL8 HYI-210ENST00000486909 905 ntTSL 5 BASIC18.01■□□□□ 0.47
TMEM116Q8NCL8 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC18.01■□□□□ 0.47
TMEM116Q8NCL8 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
TMEM116Q8NCL8 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
TMEM116Q8NCL8 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
TMEM116Q8NCL8 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TMEM116Q8NCL8 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TMEM116Q8NCL8 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
TMEM116Q8NCL8 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC18■□□□□ 0.47
TMEM116Q8NCL8 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC18■□□□□ 0.47
TMEM116Q8NCL8 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TMEM116Q8NCL8 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
TMEM116Q8NCL8 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
TMEM116Q8NCL8 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TMEM116Q8NCL8 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TMEM116Q8NCL8 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
TMEM116Q8NCL8 NFE2L3P1-201ENST00000588207 1959 ntBASIC17.99■□□□□ 0.47
TMEM116Q8NCL8 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TMEM116Q8NCL8 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
TMEM116Q8NCL8 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TMEM116Q8NCL8 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
TMEM116Q8NCL8 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TMEM116Q8NCL8 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TMEM116Q8NCL8 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TMEM116Q8NCL8 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
TMEM116Q8NCL8 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TMEM116Q8NCL8 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
TMEM116Q8NCL8 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC17.98■□□□□ 0.47
TMEM116Q8NCL8 LONRF2P2-201ENST00000439212 571 ntBASIC17.98■□□□□ 0.47
TMEM116Q8NCL8 DUX4L18-201ENST00000553347 1267 ntBASIC17.98■□□□□ 0.47
TMEM116Q8NCL8 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC17.98■□□□□ 0.47
TMEM116Q8NCL8 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TMEM116Q8NCL8 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
TMEM116Q8NCL8 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TMEM116Q8NCL8 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TMEM116Q8NCL8 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TMEM116Q8NCL8 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TMEM116Q8NCL8 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TMEM116Q8NCL8 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TMEM116Q8NCL8 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TMEM116Q8NCL8 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC17.98■□□□□ 0.47
TMEM116Q8NCL8 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TMEM116Q8NCL8 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TMEM116Q8NCL8 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TMEM116Q8NCL8 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
TMEM116Q8NCL8 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC17.97■□□□□ 0.47
TMEM116Q8NCL8 AC139795.1-202ENST00000500444 432 ntBASIC17.97■□□□□ 0.47
TMEM116Q8NCL8 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC17.97■□□□□ 0.47
TMEM116Q8NCL8 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TMEM116Q8NCL8 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
TMEM116Q8NCL8 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC17.97■□□□□ 0.47
TMEM116Q8NCL8 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC17.97■□□□□ 0.47
TMEM116Q8NCL8 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC17.97■□□□□ 0.47
TMEM116Q8NCL8 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
TMEM116Q8NCL8 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TMEM116Q8NCL8 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TMEM116Q8NCL8 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
TMEM116Q8NCL8 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
TMEM116Q8NCL8 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC17.96■□□□□ 0.47
TMEM116Q8NCL8 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC17.96■□□□□ 0.47
TMEM116Q8NCL8 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TMEM116Q8NCL8 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
TMEM116Q8NCL8 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC17.96■□□□□ 0.46
TMEM116Q8NCL8 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TMEM116Q8NCL8 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TMEM116Q8NCL8 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
TMEM116Q8NCL8 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC17.95■□□□□ 0.46
TMEM116Q8NCL8 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
TMEM116Q8NCL8 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC17.95■□□□□ 0.46
TMEM116Q8NCL8 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
TMEM116Q8NCL8 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC17.95■□□□□ 0.46
TMEM116Q8NCL8 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
TMEM116Q8NCL8 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC17.95■□□□□ 0.46
TMEM116Q8NCL8 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TMEM116Q8NCL8 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
TMEM116Q8NCL8 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TMEM116Q8NCL8 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
TMEM116Q8NCL8 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TMEM116Q8NCL8 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC17.95■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms