Protein–RNA interactions for Protein: Q2TBC4

PRICKLE4, Prickle-like protein 4, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE4Q2TBC4 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC21.38■■□□□ 1.01
PRICKLE4Q2TBC4 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC21.38■■□□□ 1.01
PRICKLE4Q2TBC4 MIR4787-201ENST00000607364 84 ntBASIC21.38■■□□□ 1.01
PRICKLE4Q2TBC4 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PRICKLE4Q2TBC4 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PRICKLE4Q2TBC4 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PRICKLE4Q2TBC4 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PRICKLE4Q2TBC4 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
PRICKLE4Q2TBC4 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC21.37■■□□□ 1.01
PRICKLE4Q2TBC4 AC092028.1-203ENST00000608262 953 ntBASIC21.37■■□□□ 1.01
PRICKLE4Q2TBC4 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PRICKLE4Q2TBC4 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PRICKLE4Q2TBC4 ALDH1A3-203ENST00000557963 1670 ntBASIC21.37■■□□□ 1.01
PRICKLE4Q2TBC4 EI24-204ENST00000527235 1625 ntTSL 5 BASIC21.37■■□□□ 1.01
PRICKLE4Q2TBC4 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PRICKLE4Q2TBC4 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
PRICKLE4Q2TBC4 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
PRICKLE4Q2TBC4 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
PRICKLE4Q2TBC4 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PRICKLE4Q2TBC4 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC21.36■■□□□ 1.01
PRICKLE4Q2TBC4 CLTA-210ENST00000540080 989 ntTSL 2 BASIC21.36■■□□□ 1.01
PRICKLE4Q2TBC4 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
PRICKLE4Q2TBC4 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PRICKLE4Q2TBC4 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PRICKLE4Q2TBC4 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC21.36■■□□□ 1.01
PRICKLE4Q2TBC4 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
PRICKLE4Q2TBC4 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
PRICKLE4Q2TBC4 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
PRICKLE4Q2TBC4 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
PRICKLE4Q2TBC4 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
PRICKLE4Q2TBC4 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
PRICKLE4Q2TBC4 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC21.35■■□□□ 1.01
PRICKLE4Q2TBC4 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
PRICKLE4Q2TBC4 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PRICKLE4Q2TBC4 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
PRICKLE4Q2TBC4 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC21.35■■□□□ 1.01
PRICKLE4Q2TBC4 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PRICKLE4Q2TBC4 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
PRICKLE4Q2TBC4 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
PRICKLE4Q2TBC4 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PRICKLE4Q2TBC4 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PRICKLE4Q2TBC4 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC21.34■■□□□ 1.01
PRICKLE4Q2TBC4 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PRICKLE4Q2TBC4 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC21.34■■□□□ 1.01
PRICKLE4Q2TBC4 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC21.34■■□□□ 1.01
PRICKLE4Q2TBC4 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
PRICKLE4Q2TBC4 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
PRICKLE4Q2TBC4 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
PRICKLE4Q2TBC4 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
PRICKLE4Q2TBC4 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
PRICKLE4Q2TBC4 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC21.33■■□□□ 1.01
PRICKLE4Q2TBC4 OR2A1-AS1-204ENST00000470435 602 ntBASIC21.33■■□□□ 1.01
PRICKLE4Q2TBC4 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC21.33■■□□□ 1.01
PRICKLE4Q2TBC4 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC21.33■■□□□ 1.01
PRICKLE4Q2TBC4 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC21.33■■□□□ 1
PRICKLE4Q2TBC4 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
PRICKLE4Q2TBC4 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PRICKLE4Q2TBC4 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC21.32■■□□□ 1
PRICKLE4Q2TBC4 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
PRICKLE4Q2TBC4 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
PRICKLE4Q2TBC4 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC21.32■■□□□ 1
PRICKLE4Q2TBC4 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC21.32■■□□□ 1
PRICKLE4Q2TBC4 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC21.32■■□□□ 1
PRICKLE4Q2TBC4 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC21.32■■□□□ 1
PRICKLE4Q2TBC4 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC21.32■■□□□ 1
PRICKLE4Q2TBC4 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PRICKLE4Q2TBC4 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
PRICKLE4Q2TBC4 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PRICKLE4Q2TBC4 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC21.31■■□□□ 1
PRICKLE4Q2TBC4 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC21.31■■□□□ 1
PRICKLE4Q2TBC4 HES6-204ENST00000409182 863 ntTSL 2 BASIC21.31■■□□□ 1
PRICKLE4Q2TBC4 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC21.31■■□□□ 1
PRICKLE4Q2TBC4 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC21.31■■□□□ 1
PRICKLE4Q2TBC4 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC21.31■■□□□ 1
PRICKLE4Q2TBC4 MIR6722-201ENST00000617286 78 ntBASIC21.31■■□□□ 1
PRICKLE4Q2TBC4 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PRICKLE4Q2TBC4 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PRICKLE4Q2TBC4 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PRICKLE4Q2TBC4 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC21.31■■□□□ 1
PRICKLE4Q2TBC4 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC21.31■■□□□ 1
PRICKLE4Q2TBC4 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC21.31■■□□□ 1
PRICKLE4Q2TBC4 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PRICKLE4Q2TBC4 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PRICKLE4Q2TBC4 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PRICKLE4Q2TBC4 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PRICKLE4Q2TBC4 CREM-229ENST00000474362 1030 ntTSL 2 BASIC21.3■■□□□ 1
PRICKLE4Q2TBC4 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC21.3■■□□□ 1
PRICKLE4Q2TBC4 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC21.3■■□□□ 1
PRICKLE4Q2TBC4 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PRICKLE4Q2TBC4 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC21.3■■□□□ 1
PRICKLE4Q2TBC4 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC21.3■■□□□ 1
PRICKLE4Q2TBC4 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
PRICKLE4Q2TBC4 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC21.3■■□□□ 1
PRICKLE4Q2TBC4 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
PRICKLE4Q2TBC4 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC21.3■■□□□ 1
PRICKLE4Q2TBC4 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PRICKLE4Q2TBC4 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PRICKLE4Q2TBC4 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC21.29■■□□□ 1
PRICKLE4Q2TBC4 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC21.29■■□□□ 1
PRICKLE4Q2TBC4 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms