Protein–RNA interactions for Protein: Q08685

CLP1, mRNA cleavage and polyadenylation factor CLP1, yeastyeast

Predicted RBP Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CLP1Q08685 SBE2YDR351W 2595 nt5.03□□□□□ -1.6
CLP1Q08685 YKR041WYKR041W 753 nt5.03□□□□□ -1.6
CLP1Q08685 YML119WYML119W 1074 nt5.03□□□□□ -1.6
CLP1Q08685 DRN1YGR093W 1524 nt5.02□□□□□ -1.61
CLP1Q08685 CTT1YGR088W 1689 nt5.02□□□□□ -1.61
CLP1Q08685 NOP8YOL144W 1455 nt5.02□□□□□ -1.61
CLP1Q08685 ATG20YDL113C 1923 nt5.02□□□□□ -1.61
CLP1Q08685 IWR1YDL115C 1062 nt5.02□□□□□ -1.61
CLP1Q08685 MF(ALPHA)2YGL089C 363 nt5.02□□□□□ -1.61
CLP1Q08685 RPA49YNL248C 1248 nt5.02□□□□□ -1.61
CLP1Q08685 YOR1YGR281W 4434 nt5.02□□□□□ -1.61
CLP1Q08685 ESF1YDR365C 1887 nt5.02□□□□□ -1.61
CLP1Q08685 VHS1YDR247W 1386 nt5.02□□□□□ -1.61
CLP1Q08685 ALD3YMR169C 1521 nt5.02□□□□□ -1.61
CLP1Q08685 ALD2YMR170C 1521 nt5.02□□□□□ -1.61
CLP1Q08685 ORC6YHR118C 1308 nt5.01□□□□□ -1.61
CLP1Q08685 SER33YIL074C 1410 nt5.01□□□□□ -1.61
CLP1Q08685 SNF11YDR073W 510 nt5.01□□□□□ -1.61
CLP1Q08685 BGL2YGR282C 942 nt5.01□□□□□ -1.61
CLP1Q08685 NSG1YHR133C 876 nt5.01□□□□□ -1.61
CLP1Q08685 FUN19YAL034C 1242 nt5.01□□□□□ -1.61
CLP1Q08685 YAL044W-AYAL044W-A 333 nt5.01□□□□□ -1.61
CLP1Q08685 MRPL15YLR312W-A 762 nt5.01□□□□□ -1.61
CLP1Q08685 ADD37YMR184W 597 nt5.01□□□□□ -1.61
CLP1Q08685 YFL034WYFL034W 3222 nt5.01□□□□□ -1.61
CLP1Q08685 GSM1YJL103C 1857 nt5□□□□□ -1.61
CLP1Q08685 MTW1YAL034W-A 870 nt5□□□□□ -1.61
CLP1Q08685 SCW10YMR305C 1170 nt5□□□□□ -1.61
CLP1Q08685 ARG8YOL140W 1272 nt5□□□□□ -1.61
CLP1Q08685 MDM30YLR368W 1797 nt5□□□□□ -1.61
CLP1Q08685 YHR177WYHR177W 1362 nt5□□□□□ -1.61
CLP1Q08685 BSC5YNR069C 1470 nt5□□□□□ -1.61
CLP1Q08685 HFA1YMR207C 6372 nt5□□□□□ -1.61
CLP1Q08685 CLF1YLR117C 2064 nt5□□□□□ -1.61
CLP1Q08685 JEM1YJL073W 1938 nt4.99□□□□□ -1.61
CLP1Q08685 TRE1YPL176C 2352 nt4.99□□□□□ -1.61
CLP1Q08685 SYG1YIL047C 2709 nt4.99□□□□□ -1.61
CLP1Q08685 RPL34AYER056C-A 366 nt4.99□□□□□ -1.61
CLP1Q08685 FEX1YOR390W 1128 nt4.99□□□□□ -1.61
CLP1Q08685 FEX2YPL279C 1128 nt4.99□□□□□ -1.61
CLP1Q08685 NHP6AYPR052C 282 nt4.99□□□□□ -1.61
CLP1Q08685 DAK1YML070W 1755 nt4.99□□□□□ -1.61
CLP1Q08685 TDA7YNL176C 1911 nt4.98□□□□□ -1.61
CLP1Q08685 NPY1YGL067W 1155 nt4.98□□□□□ -1.61
CLP1Q08685 ARC1YGL105W 1131 nt4.98□□□□□ -1.61
CLP1Q08685 SPL2YHR136C 447 nt4.98□□□□□ -1.61
CLP1Q08685 PDX3YBR035C 687 nt4.98□□□□□ -1.61
CLP1Q08685 UBP7YIL156W 3216 nt4.98□□□□□ -1.61
CLP1Q08685 PFK1YGR240C 2964 nt4.98□□□□□ -1.61
CLP1Q08685 VHC1YBR235W 3363 nt4.98□□□□□ -1.61
CLP1Q08685 YIL171W-AYIL171W-A 453 nt4.97□□□□□ -1.61
CLP1Q08685 YJL220WYJL220W 453 nt4.97□□□□□ -1.61
CLP1Q08685 ROT1YMR200W 771 nt4.97□□□□□ -1.61
CLP1Q08685 RPL21BYPL079W 483 nt4.97□□□□□ -1.61
CLP1Q08685 SKM1YOL113W 1968 nt4.96□□□□□ -1.61
CLP1Q08685 SEH1YGL100W 1050 nt4.96□□□□□ -1.62
CLP1Q08685 YIR017W-AYIR017W-A 600 nt4.96□□□□□ -1.62
CLP1Q08685 snR19snR19 568 nt4.96□□□□□ -1.62
CLP1Q08685 STE50YCL032W 1041 nt4.96□□□□□ -1.62
CLP1Q08685 TRM44YPL030W 1704 nt4.96□□□□□ -1.62
CLP1Q08685 HOT1YMR172W 2160 nt4.96□□□□□ -1.62
CLP1Q08685 IZH3YLR023C 1632 nt4.96□□□□□ -1.62
CLP1Q08685 BIT2YBR270C 1638 nt4.96□□□□□ -1.62
CLP1Q08685 KCC4YCL024W 3114 nt4.96□□□□□ -1.62
CLP1Q08685 GUS1YGL245W 2127 nt4.96□□□□□ -1.62
CLP1Q08685 UBP9YER098W 2265 nt4.95□□□□□ -1.62
CLP1Q08685 GLT1YDL171C 6438 nt4.95□□□□□ -1.62
CLP1Q08685 FAU1YER183C 636 nt4.95□□□□□ -1.62
CLP1Q08685 YER187WYER187W 426 nt4.95□□□□□ -1.62
CLP1Q08685 DAM1YGR113W 1032 nt4.95□□□□□ -1.62
CLP1Q08685 YNG2YHR090C 849 nt4.95□□□□□ -1.62
CLP1Q08685 YHR212W-AYHR212W-A 204 nt4.95□□□□□ -1.62
CLP1Q08685 NIT2YJL126W 924 nt4.95□□□□□ -1.62
CLP1Q08685 YAR061WYAR061W 204 nt4.95□□□□□ -1.62
CLP1Q08685 RCL1YOL010W 1104 nt4.95□□□□□ -1.62
CLP1Q08685 YOR024WYOR024W 324 nt4.95□□□□□ -1.62
CLP1Q08685 CDC21YOR074C 915 nt4.95□□□□□ -1.62
CLP1Q08685 MGR2YPL098C 342 nt4.95□□□□□ -1.62
CLP1Q08685 THP1YOL072W 1368 nt4.94□□□□□ -1.62
CLP1Q08685 MCH4YOL119C 1506 nt4.94□□□□□ -1.62
CLP1Q08685 STE12YHR084W 2067 nt4.94□□□□□ -1.62
CLP1Q08685 YLR125WYLR125W 411 nt4.94□□□□□ -1.62
CLP1Q08685 SOL1YNR034W 966 nt4.94□□□□□ -1.62
CLP1Q08685 RMI1YPL024W 726 nt4.94□□□□□ -1.62
CLP1Q08685 HOM3YER052C 1584 nt4.94□□□□□ -1.62
CLP1Q08685 SLT2YHR030C 1455 nt4.94□□□□□ -1.62
CLP1Q08685 YOR342CYOR342C 960 nt4.93□□□□□ -1.62
CLP1Q08685 KDX1YKL161C 1302 nt4.93□□□□□ -1.62
CLP1Q08685 AVT1YJR001W 1809 nt4.93□□□□□ -1.62
CLP1Q08685 DUR1,2YBR208C 5508 nt4.92□□□□□ -1.62
CLP1Q08685 SSA2YLL024C 1920 nt4.92□□□□□ -1.62
CLP1Q08685 YHL049CYHL049C 816 nt4.92□□□□□ -1.62
CLP1Q08685 SFK1YKL051W 1062 nt4.92□□□□□ -1.62
CLP1Q08685 SFT2YBL102W 648 nt4.92□□□□□ -1.62
CLP1Q08685 SSB1YDL229W 1842 nt4.92□□□□□ -1.62
CLP1Q08685 SSB2YNL209W 1842 nt4.92□□□□□ -1.62
CLP1Q08685 TIF4632YGL049C 2745 nt4.92□□□□□ -1.62
CLP1Q08685 TUB3YML124C 1338 nt4.92□□□□□ -1.62
CLP1Q08685 MET3YJR010W 1536 nt4.92□□□□□ -1.62
CLP1Q08685 FUI1YBL042C 1920 nt4.91□□□□□ -1.62
Retrieved 100 of 7,029 protein–RNA pairs in 11.3 ms