Protein–RNA interactions for Protein: Q04781

RKR1, E3 ubiquitin-protein ligase listerin, yeastyeast

Predictions only

Length 1,562 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RKR1Q04781 MSC2YDR205W 2175 nt6.95□□□□□ -1.3
RKR1Q04781 AKL1YBR059C 3327 nt6.95□□□□□ -1.3
RKR1Q04781 UGA1YGR019W 1416 nt6.95□□□□□ -1.3
RKR1Q04781 NCS6YGL211W 1080 nt6.95□□□□□ -1.3
RKR1Q04781 ARO80YDR421W 2853 nt6.94□□□□□ -1.3
RKR1Q04781 AST1YBL069W 1290 nt6.94□□□□□ -1.3
RKR1Q04781 YPL162CYPL162C 822 nt6.94□□□□□ -1.3
RKR1Q04781 ABZ1YNR033W 2364 nt6.93□□□□□ -1.3
RKR1Q04781 SGV1YPR161C 1974 nt6.93□□□□□ -1.3
RKR1Q04781 RRB1YMR131C 1536 nt6.92□□□□□ -1.3
RKR1Q04781 ARG82YDR173C 1068 nt6.92□□□□□ -1.3
RKR1Q04781 YJL215CYJL215C 360 nt6.92□□□□□ -1.3
RKR1Q04781 SWI1YPL016W 3945 nt6.92□□□□□ -1.3
RKR1Q04781 FRE6YLL051C 2139 nt6.92□□□□□ -1.3
RKR1Q04781 RVB1YDR190C 1392 nt6.91□□□□□ -1.3
RKR1Q04781 YCL012CYCL012C 405 nt6.91□□□□□ -1.3
RKR1Q04781 STE20YHL007C 2820 nt6.91□□□□□ -1.3
RKR1Q04781 RPL12AYEL054C 498 nt6.91□□□□□ -1.3
RKR1Q04781 YNL194CYNL194C 906 nt6.91□□□□□ -1.3
RKR1Q04781 MET16YPR167C 786 nt6.91□□□□□ -1.3
RKR1Q04781 VTC2YFL004W 2487 nt6.9□□□□□ -1.3
RKR1Q04781 SYP1YCR030C 2613 nt6.9□□□□□ -1.3
RKR1Q04781 IRC22YEL001C 678 nt6.89□□□□□ -1.31
RKR1Q04781 RPL28YGL103W 450 nt6.89□□□□□ -1.31
RKR1Q04781 ADY3YDL239C 2373 nt6.89□□□□□ -1.31
RKR1Q04781 TRM11YOL124C 1302 nt6.89□□□□□ -1.31
RKR1Q04781 YOR131CYOR131C 657 nt6.88□□□□□ -1.31
RKR1Q04781 YDL228CYDL228C 642 nt6.87□□□□□ -1.31
RKR1Q04781 ATG22YCL038C 1587 nt6.87□□□□□ -1.31
RKR1Q04781 MGS1YNL218W 1764 nt6.87□□□□□ -1.31
RKR1Q04781 LOS1YKL205W 3303 nt6.87□□□□□ -1.31
RKR1Q04781 ATH1YPR026W 3636 nt6.86□□□□□ -1.31
RKR1Q04781 YFT2YDR319C 825 nt6.86□□□□□ -1.31
RKR1Q04781 BUD25YER014C-A 462 nt6.86□□□□□ -1.31
RKR1Q04781 LSO1YJR005C-A 282 nt6.86□□□□□ -1.31
RKR1Q04781 PHO87YCR037C 2772 nt6.86□□□□□ -1.31
RKR1Q04781 YCR061WYCR061W 1896 nt6.86□□□□□ -1.31
RKR1Q04781 BSP1YPR171W 1731 nt6.86□□□□□ -1.31
RKR1Q04781 YEL067CYEL067C 588 nt6.86□□□□□ -1.31
RKR1Q04781 CDC12YHR107C 1224 nt6.86□□□□□ -1.31
RKR1Q04781 HPM1YIL110W 1134 nt6.86□□□□□ -1.31
RKR1Q04781 YJR096WYJR096W 849 nt6.86□□□□□ -1.31
RKR1Q04781 MAK3YPR051W 531 nt6.86□□□□□ -1.31
RKR1Q04781 AAD4YDL243C 990 nt6.85□□□□□ -1.31
RKR1Q04781 COQ4YDR204W 1008 nt6.85□□□□□ -1.31
RKR1Q04781 PUS5YLR165C 765 nt6.85□□□□□ -1.31
RKR1Q04781 YDR282CYDR282C 1245 nt6.84□□□□□ -1.31
RKR1Q04781 CNN1YFR046C 1086 nt6.84□□□□□ -1.31
RKR1Q04781 CNB1YKL190W 528 nt6.84□□□□□ -1.31
RKR1Q04781 VAN1YML115C 1608 nt6.83□□□□□ -1.32
RKR1Q04781 RPB7YDR404C 516 nt6.83□□□□□ -1.32
RKR1Q04781 FMP46YKR049C 402 nt6.83□□□□□ -1.32
RKR1Q04781 RMI1YPL024W 726 nt6.83□□□□□ -1.32
RKR1Q04781 KIN2YLR096W 3444 nt6.83□□□□□ -1.32
RKR1Q04781 NRD1YNL251C 1728 nt6.83□□□□□ -1.32
RKR1Q04781 CDC28YBR160W 897 nt6.82□□□□□ -1.32
RKR1Q04781 FAR10YLR238W 1437 nt6.82□□□□□ -1.32
RKR1Q04781 AGA1YNR044W 2178 nt6.82□□□□□ -1.32
RKR1Q04781 RAD28YDR030C 1521 nt6.81□□□□□ -1.32
RKR1Q04781 YPL245WYPL245W 1365 nt6.81□□□□□ -1.32
RKR1Q04781 KCC4YCL024W 3114 nt6.8□□□□□ -1.32
RKR1Q04781 GCR1YPL075W 2358 nt6.8□□□□□ -1.32
RKR1Q04781 SUR2YDR297W 1050 nt6.8□□□□□ -1.32
RKR1Q04781 NTR2YKR022C 969 nt6.8□□□□□ -1.32
RKR1Q04781 MRPL3YMR024W 1173 nt6.8□□□□□ -1.32
RKR1Q04781 YPR059CYPR059C 387 nt6.8□□□□□ -1.32
RKR1Q04781 CWH43YCR017C 2862 nt6.8□□□□□ -1.32
RKR1Q04781 LAG2YOL025W 1983 nt6.79□□□□□ -1.32
RKR1Q04781 FLC1YPL221W 2382 nt6.79□□□□□ -1.32
RKR1Q04781 TIF34YMR146C 1044 nt6.79□□□□□ -1.32
RKR1Q04781 ZPR1YGR211W 1461 nt6.79□□□□□ -1.32
RKR1Q04781 RSF1YMR030W 1131 nt6.78□□□□□ -1.32
RKR1Q04781 SPO19YPL130W 672 nt6.78□□□□□ -1.32
RKR1Q04781 YNR065CYNR065C 3351 nt6.78□□□□□ -1.32
RKR1Q04781 PWP1YLR196W 1731 nt6.78□□□□□ -1.32
RKR1Q04781 KRE29YER038C 1395 nt6.78□□□□□ -1.32
RKR1Q04781 GCV1YDR019C 1203 nt6.78□□□□□ -1.32
RKR1Q04781 MNN2YBR015C 1794 nt6.77□□□□□ -1.32
RKR1Q04781 MIC26YGR235C 702 nt6.76□□□□□ -1.33
RKR1Q04781 YKL023WYKL023W 834 nt6.76□□□□□ -1.33
RKR1Q04781 JHD2YJR119C 2187 nt6.75□□□□□ -1.33
RKR1Q04781 BZZ1YHR114W 1902 nt6.75□□□□□ -1.33
RKR1Q04781 DAN1YJR150C 897 nt6.74□□□□□ -1.33
RKR1Q04781 MCM1YMR043W 861 nt6.74□□□□□ -1.33
RKR1Q04781 RET3YPL010W 570 nt6.74□□□□□ -1.33
RKR1Q04781 DSS4YPR017C 432 nt6.74□□□□□ -1.33
RKR1Q04781 YMR221CYMR221C 1515 nt6.74□□□□□ -1.33
RKR1Q04781 MAL11YGR289C 1851 nt6.74□□□□□ -1.33
RKR1Q04781 SSL1YLR005W 1386 nt6.73□□□□□ -1.33
RKR1Q04781 TDA1YMR291W 1761 nt6.73□□□□□ -1.33
RKR1Q04781 YDR445CYDR445C 408 nt6.72□□□□□ -1.33
RKR1Q04781 ASF2YDL197C 1578 nt6.72□□□□□ -1.33
RKR1Q04781 HXT2YMR011W 1626 nt6.71□□□□□ -1.33
RKR1Q04781 MBR1YKL093W 1020 nt6.71□□□□□ -1.34
RKR1Q04781 EFT2YDR385W 2529 nt6.71□□□□□ -1.34
RKR1Q04781 EFT1YOR133W 2529 nt6.71□□□□□ -1.34
RKR1Q04781 MKK2YPL140C 1521 nt6.71□□□□□ -1.34
RKR1Q04781 YHR182WYHR182W 2358 nt6.71□□□□□ -1.34
RKR1Q04781 CAB3YKL088W 1716 nt6.7□□□□□ -1.34
RKR1Q04781 CWC2YDL209C 1020 nt6.69□□□□□ -1.34
Retrieved 100 of 7,029 protein–RNA pairs in 14.6 ms