Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
HCFC1P51610 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
HCFC1P51610 AC034268.1-201ENST00000441047 882 ntBASIC20.1■□□□□ 0.81
HCFC1P51610 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC20.1■□□□□ 0.81
HCFC1P51610 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
HCFC1P51610 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
HCFC1P51610 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC20.1■□□□□ 0.81
HCFC1P51610 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
HCFC1P51610 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC20.1■□□□□ 0.81
HCFC1P51610 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC20.1■□□□□ 0.81
HCFC1P51610 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
HCFC1P51610 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
HCFC1P51610 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC20.09■□□□□ 0.81
HCFC1P51610 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
HCFC1P51610 AC027682.1-201ENST00000562846 899 ntBASIC20.09■□□□□ 0.81
HCFC1P51610 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
HCFC1P51610 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
HCFC1P51610 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
HCFC1P51610 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC20.09■□□□□ 0.81
HCFC1P51610 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
HCFC1P51610 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
HCFC1P51610 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
HCFC1P51610 AC099791.1-201ENST00000416440 715 ntBASIC20.09■□□□□ 0.81
HCFC1P51610 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC20.09■□□□□ 0.81
HCFC1P51610 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC20.09■□□□□ 0.81
HCFC1P51610 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
HCFC1P51610 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
HCFC1P51610 JTB-203ENST00000368589 1216 ntTSL 2 BASIC20.08■□□□□ 0.8
HCFC1P51610 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
HCFC1P51610 REST-206ENST00000612429 1376 ntTSL 5 BASIC20.08■□□□□ 0.8
HCFC1P51610 REST-207ENST00000616975 1370 ntTSL 5 BASIC20.08■□□□□ 0.8
HCFC1P51610 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
HCFC1P51610 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC20.08■□□□□ 0.8
HCFC1P51610 ANKRD20A6P-201ENST00000618763 204 ntBASIC20.07■□□□□ 0.8
HCFC1P51610 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC20.07■□□□□ 0.8
HCFC1P51610 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
HCFC1P51610 IRS3P-201ENST00000223076 1006 ntBASIC20.07■□□□□ 0.8
HCFC1P51610 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
HCFC1P51610 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC20.07■□□□□ 0.8
HCFC1P51610 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC20.07■□□□□ 0.8
HCFC1P51610 AC008764.7-201ENST00000593779 1081 ntBASIC20.07■□□□□ 0.8
HCFC1P51610 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC20.07■□□□□ 0.8
HCFC1P51610 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC20.07■□□□□ 0.8
HCFC1P51610 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
HCFC1P51610 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
HCFC1P51610 HACD1-201ENST00000326961 773 ntTSL 2 BASIC20.06■□□□□ 0.8
HCFC1P51610 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC20.06■□□□□ 0.8
HCFC1P51610 AL138724.1-201ENST00000606771 1088 ntBASIC20.06■□□□□ 0.8
HCFC1P51610 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
HCFC1P51610 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
HCFC1P51610 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
HCFC1P51610 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC20.06■□□□□ 0.8
HCFC1P51610 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC20.06■□□□□ 0.8
HCFC1P51610 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
HCFC1P51610 SNX3-202ENST00000349379 890 ntTSL 2 BASIC20.05■□□□□ 0.8
HCFC1P51610 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC20.05■□□□□ 0.8
HCFC1P51610 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
HCFC1P51610 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
HCFC1P51610 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
HCFC1P51610 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
HCFC1P51610 NKILA-201ENST00000613231 537 ntTSL 4 BASIC20.05■□□□□ 0.8
HCFC1P51610 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC20.05■□□□□ 0.8
HCFC1P51610 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
HCFC1P51610 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC20.05■□□□□ 0.8
HCFC1P51610 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC20.05■□□□□ 0.8
HCFC1P51610 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
HCFC1P51610 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HCFC1P51610 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
HCFC1P51610 AC092803.2-201ENST00000564287 1899 ntBASIC20.04■□□□□ 0.8
HCFC1P51610 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HCFC1P51610 STK32C-205ENST00000456004 607 ntTSL 2 BASIC20.04■□□□□ 0.8
HCFC1P51610 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
HCFC1P51610 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC20.04■□□□□ 0.8
HCFC1P51610 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HCFC1P51610 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
HCFC1P51610 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
HCFC1P51610 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
HCFC1P51610 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC20.03■□□□□ 0.8
HCFC1P51610 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HCFC1P51610 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
HCFC1P51610 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC20.03■□□□□ 0.8
HCFC1P51610 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HCFC1P51610 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
HCFC1P51610 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HCFC1P51610 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
HCFC1P51610 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
HCFC1P51610 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HCFC1P51610 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC20.03■□□□□ 0.8
HCFC1P51610 AC092171.4-201ENST00000609130 632 ntBASIC20.03■□□□□ 0.8
HCFC1P51610 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HCFC1P51610 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
HCFC1P51610 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
HCFC1P51610 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
HCFC1P51610 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC20.02■□□□□ 0.8
HCFC1P51610 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
HCFC1P51610 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
HCFC1P51610 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC20.02■□□□□ 0.8
HCFC1P51610 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
HCFC1P51610 AC009102.2-201ENST00000606772 1639 ntBASIC20.02■□□□□ 0.8
HCFC1P51610 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms