Protein–RNA interactions for Protein: P48412

UPF3, Nonsense-mediated mRNA decay protein 3, yeastyeast

Known RBP Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UPF3P48412 CTR1YPR124W 1221 nt5.25□□□□□ -1.57
UPF3P48412 MUP3YHL036W 1641 nt5.25□□□□□ -1.57
UPF3P48412 NTH2YBR001C 2343 nt5.25□□□□□ -1.57
UPF3P48412 RAT1YOR048C 3021 nt5.25□□□□□ -1.57
UPF3P48412 PHO90YJL198W 2646 nt5.25□□□□□ -1.57
UPF3P48412 MCX1YBR227C 1563 nt5.25□□□□□ -1.57
UPF3P48412 ELP2YGR200C 2367 nt5.24□□□□□ -1.57
UPF3P48412 GEP3YOR205C 1671 nt5.24□□□□□ -1.57
UPF3P48412 ZRC1YMR243C 1329 nt5.24□□□□□ -1.57
UPF3P48412 HRP1YOL123W 1605 nt5.24□□□□□ -1.57
UPF3P48412 YDL172CYDL172C 480 nt5.24□□□□□ -1.57
UPF3P48412 UBC1YDR177W 648 nt5.24□□□□□ -1.57
UPF3P48412 MRPL7YDR237W 879 nt5.24□□□□□ -1.57
UPF3P48412 YER085CYER085C 522 nt5.24□□□□□ -1.57
UPF3P48412 VMA16YHR026W 642 nt5.24□□□□□ -1.57
UPF3P48412 YKR041WYKR041W 753 nt5.24□□□□□ -1.57
UPF3P48412 PIN2YOR104W 849 nt5.24□□□□□ -1.57
UPF3P48412 YPR195CYPR195C 330 nt5.24□□□□□ -1.57
UPF3P48412 MRPL36YBR122C 534 nt5.24□□□□□ -1.57
UPF3P48412 VTC2YFL004W 2487 nt5.24□□□□□ -1.57
UPF3P48412 MPC54YOR177C 1395 nt5.24□□□□□ -1.57
UPF3P48412 KTR7YIL085C 1554 nt5.24□□□□□ -1.57
UPF3P48412 MKS1YNL076W 1755 nt5.24□□□□□ -1.57
UPF3P48412 SIA1YOR137C 1869 nt5.24□□□□□ -1.57
UPF3P48412 CDC19YAL038W 1503 nt5.23□□□□□ -1.57
UPF3P48412 tN(GUU)CtN(GUU)C 74 nt5.23□□□□□ -1.57
UPF3P48412 tN(GUU)FtN(GUU)F 74 nt5.23□□□□□ -1.57
UPF3P48412 tN(GUU)GtN(GUU)G 74 nt5.23□□□□□ -1.57
UPF3P48412 tN(GUU)KtN(GUU)K 74 nt5.23□□□□□ -1.57
UPF3P48412 tN(GUU)LtN(GUU)L 74 nt5.23□□□□□ -1.57
UPF3P48412 tN(GUU)N1tN(GUU)N1 74 nt5.23□□□□□ -1.57
UPF3P48412 tN(GUU)N2tN(GUU)N2 74 nt5.23□□□□□ -1.57
UPF3P48412 tN(GUU)O1tN(GUU)O1 74 nt5.23□□□□□ -1.57
UPF3P48412 tN(GUU)O2tN(GUU)O2 74 nt5.23□□□□□ -1.57
UPF3P48412 tN(GUU)PtN(GUU)P 74 nt5.23□□□□□ -1.57
UPF3P48412 DCN1YLR128W 810 nt5.23□□□□□ -1.57
UPF3P48412 YLR346CYLR346C 306 nt5.23□□□□□ -1.57
UPF3P48412 TPP1YMR156C 717 nt5.23□□□□□ -1.57
UPF3P48412 DED81YHR019C 1665 nt5.23□□□□□ -1.57
UPF3P48412 PRM7YDL039C 2097 nt5.22□□□□□ -1.57
UPF3P48412 GCS1YDL226C 1059 nt5.22□□□□□ -1.57
UPF3P48412 COX26YDR119W-A 201 nt5.22□□□□□ -1.57
UPF3P48412 YGR066CYGR066C 879 nt5.22□□□□□ -1.57
UPF3P48412 CSL4YNL232W 879 nt5.22□□□□□ -1.57
UPF3P48412 YNR075C-AYNR075C-A 93 nt5.22□□□□□ -1.57
UPF3P48412 ERI1YPL096C-A 207 nt5.22□□□□□ -1.57
UPF3P48412 ARN1YHL040C 1884 nt5.22□□□□□ -1.57
UPF3P48412 ASF2YDL197C 1578 nt5.21□□□□□ -1.57
UPF3P48412 MEF2YJL102W 2460 nt5.21□□□□□ -1.57
UPF3P48412 FOL1YNL256W 2475 nt5.21□□□□□ -1.57
UPF3P48412 TIM21YGR033C 720 nt5.21□□□□□ -1.58
UPF3P48412 NQM1YGR043C 1002 nt5.21□□□□□ -1.58
UPF3P48412 MND2YIR025W 1107 nt5.21□□□□□ -1.58
UPF3P48412 YBR196C-BYBR196C-B 105 nt5.21□□□□□ -1.58
UPF3P48412 MDL1YLR188W 2088 nt5.2□□□□□ -1.58
UPF3P48412 LSM6YDR378C 261 nt5.2□□□□□ -1.58
UPF3P48412 YIL047C-AYIL047C-A 369 nt5.2□□□□□ -1.58
UPF3P48412 YNL019CYNL019C 855 nt5.2□□□□□ -1.58
UPF3P48412 YNL033WYNL033W 855 nt5.2□□□□□ -1.58
UPF3P48412 YNR068CYNR068C 819 nt5.2□□□□□ -1.58
UPF3P48412 YOL050CYOL050C 321 nt5.2□□□□□ -1.58
UPF3P48412 YPR015CYPR015C 744 nt5.2□□□□□ -1.58
UPF3P48412 STE50YCL032W 1041 nt5.2□□□□□ -1.58
UPF3P48412 ADE13YLR359W 1449 nt5.2□□□□□ -1.58
UPF3P48412 RGP1YDR137W 1992 nt5.2□□□□□ -1.58
UPF3P48412 ATE1YGL017W 1512 nt5.19□□□□□ -1.58
UPF3P48412 SOG2YOR353C 2376 nt5.19□□□□□ -1.58
UPF3P48412 TRM8YDL201W 861 nt5.19□□□□□ -1.58
UPF3P48412 CIA2YHR122W 696 nt5.19□□□□□ -1.58
UPF3P48412 YIL086CYIL086C 309 nt5.19□□□□□ -1.58
UPF3P48412 YKR047WYKR047W 306 nt5.19□□□□□ -1.58
UPF3P48412 TFS1YLR178C 660 nt5.19□□□□□ -1.58
UPF3P48412 MRPL15YLR312W-A 762 nt5.19□□□□□ -1.58
UPF3P48412 OAZ1YPL052W 879 nt5.19□□□□□ -1.58
UPF3P48412 ECM33YBR078W 1290 nt5.19□□□□□ -1.58
UPF3P48412 CAB3YKL088W 1716 nt5.19□□□□□ -1.58
UPF3P48412 VHS2YIL135C 1311 nt5.19□□□□□ -1.58
UPF3P48412 ASA1YPR085C 1332 nt5.19□□□□□ -1.58
UPF3P48412 IMA1YGR287C 1770 nt5.19□□□□□ -1.58
UPF3P48412 DON1YDR273W 1098 nt5.18□□□□□ -1.58
UPF3P48412 RPS19BYNL302C 435 nt5.18□□□□□ -1.58
UPF3P48412 DAL82YNL314W 768 nt5.18□□□□□ -1.58
UPF3P48412 GPM3YOL056W 912 nt5.18□□□□□ -1.58
UPF3P48412 BRF1YGR246C 1791 nt5.18□□□□□ -1.58
UPF3P48412 OCT1YKL134C 2319 nt5.18□□□□□ -1.58
UPF3P48412 DNF2YDR093W 4839 nt5.18□□□□□ -1.58
UPF3P48412 PRM2YIL037C 1971 nt5.17□□□□□ -1.58
UPF3P48412 YCR097W-AYCR097W-A 267 nt5.17□□□□□ -1.58
UPF3P48412 EFM4YIL064W 774 nt5.17□□□□□ -1.58
UPF3P48412 MTC2YKL098W 1074 nt5.17□□□□□ -1.58
UPF3P48412 SPC24YMR117C 642 nt5.17□□□□□ -1.58
UPF3P48412 MDY2YOL111C 639 nt5.17□□□□□ -1.58
UPF3P48412 QDR1YIL120W 1692 nt5.17□□□□□ -1.58
UPF3P48412 MOT2YER068W 1764 nt5.16□□□□□ -1.58
UPF3P48412 OCA5YHL029C 2040 nt5.16□□□□□ -1.58
UPF3P48412 DPH2YKL191W 1605 nt5.16□□□□□ -1.58
UPF3P48412 PHO12YHR215W 1404 nt5.16□□□□□ -1.58
UPF3P48412 PHO11YAR071W 1404 nt5.16□□□□□ -1.58
UPF3P48412 SIP5YMR140W 1470 nt5.16□□□□□ -1.58
UPF3P48412 RMD1YDL001W 1293 nt5.16□□□□□ -1.58
Retrieved 100 of 7,029 protein–RNA pairs in 61.3 ms