Protein–RNA interactions for Protein: P47821

SSN8, RNA polymerase II holoenzyme cyclin-like subunit, yeastyeast

Predictions only

Length 323 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSN8P47821 GCS1YDL226C 1059 nt4.69□□□□□ -1.66
SSN8P47821 FMP48YGR052W 1110 nt4.69□□□□□ -1.66
SSN8P47821 YGR066CYGR066C 879 nt4.69□□□□□ -1.66
SSN8P47821 PIN2YOR104W 849 nt4.69□□□□□ -1.66
SSN8P47821 SMF3YLR034C 1422 nt4.69□□□□□ -1.66
SSN8P47821 SHE10YGL228W 1734 nt4.69□□□□□ -1.66
SSN8P47821 FOL1YNL256W 2475 nt4.68□□□□□ -1.66
SSN8P47821 HIR2YOR038C 2628 nt4.68□□□□□ -1.66
SSN8P47821 YPL260WYPL260W 1656 nt4.68□□□□□ -1.66
SSN8P47821 RMR1YGL250W 726 nt4.68□□□□□ -1.66
SSN8P47821 YML101C-AYML101C-A 318 nt4.68□□□□□ -1.66
SSN8P47821 SPC24YMR117C 642 nt4.68□□□□□ -1.66
SSN8P47821 TOM40YMR203W 1164 nt4.68□□□□□ -1.66
SSN8P47821 MNN1YER001W 2289 nt4.68□□□□□ -1.66
SSN8P47821 SSA2YLL024C 1920 nt4.68□□□□□ -1.66
SSN8P47821 ALG2YGL065C 1512 nt4.67□□□□□ -1.66
SSN8P47821 PRO2YOR323C 1371 nt4.67□□□□□ -1.66
SSN8P47821 ACF2YLR144C 2340 nt4.67□□□□□ -1.66
SSN8P47821 MEC3YLR288C 1425 nt4.67□□□□□ -1.66
SSN8P47821 TFB3YDR460W 966 nt4.67□□□□□ -1.66
SSN8P47821 YDR541CYDR541C 1035 nt4.67□□□□□ -1.66
SSN8P47821 YPR195CYPR195C 330 nt4.67□□□□□ -1.66
SSN8P47821 MRE11YMR224C 2079 nt4.67□□□□□ -1.66
SSN8P47821 CDC15YAR019C 2925 nt4.67□□□□□ -1.66
SSN8P47821 GDB1YPR184W 4611 nt4.67□□□□□ -1.66
SSN8P47821 YOR1YGR281W 4434 nt4.66□□□□□ -1.66
SSN8P47821 GRC3YLL035W 1899 nt4.66□□□□□ -1.66
SSN8P47821 TFG1YGR186W 2208 nt4.66□□□□□ -1.66
SSN8P47821 SUM1YDR310C 3189 nt4.66□□□□□ -1.66
SSN8P47821 SAS4YDR181C 1446 nt4.66□□□□□ -1.66
SSN8P47821 COX26YDR119W-A 201 nt4.66□□□□□ -1.66
SSN8P47821 IRC7YFR055W 1023 nt4.66□□□□□ -1.66
SSN8P47821 CBP4YGR174C 513 nt4.66□□□□□ -1.66
SSN8P47821 IPI1YHR085W 1005 nt4.66□□□□□ -1.66
SSN8P47821 MRPL4YLR439W 960 nt4.66□□□□□ -1.66
SSN8P47821 LST8YNL006W 912 nt4.66□□□□□ -1.66
SSN8P47821 COG5YNL051W 1212 nt4.66□□□□□ -1.66
SSN8P47821 UBC4YBR082C 447 nt4.66□□□□□ -1.66
SSN8P47821 ARR3YPR201W 1215 nt4.66□□□□□ -1.66
SSN8P47821 CLA4YNL298W 2529 nt4.66□□□□□ -1.66
SSN8P47821 YFL034WYFL034W 3222 nt4.65□□□□□ -1.66
SSN8P47821 KAP114YGL241W 3015 nt4.65□□□□□ -1.66
SSN8P47821 LAP2YNL045W 2016 nt4.65□□□□□ -1.66
SSN8P47821 GEP3YOR205C 1671 nt4.65□□□□□ -1.66
SSN8P47821 AUA1YFL010W-A 285 nt4.65□□□□□ -1.67
SSN8P47821 YGR022CYGR022C 330 nt4.65□□□□□ -1.67
SSN8P47821 YJL215CYJL215C 360 nt4.65□□□□□ -1.67
SSN8P47821 MRPL22YNL177C 930 nt4.65□□□□□ -1.67
SSN8P47821 STE50YCL032W 1041 nt4.65□□□□□ -1.67
SSN8P47821 YDL124WYDL124W 939 nt4.64□□□□□ -1.67
SSN8P47821 YHP1YDR451C 1062 nt4.64□□□□□ -1.67
SSN8P47821 SUA5YGL169W 1281 nt4.64□□□□□ -1.67
SSN8P47821 tN(GUU)CtN(GUU)C 74 nt4.64□□□□□ -1.67
SSN8P47821 tN(GUU)FtN(GUU)F 74 nt4.64□□□□□ -1.67
SSN8P47821 tN(GUU)GtN(GUU)G 74 nt4.64□□□□□ -1.67
SSN8P47821 tN(GUU)KtN(GUU)K 74 nt4.64□□□□□ -1.67
SSN8P47821 tN(GUU)LtN(GUU)L 74 nt4.64□□□□□ -1.67
SSN8P47821 tN(GUU)N1tN(GUU)N1 74 nt4.64□□□□□ -1.67
SSN8P47821 tN(GUU)N2tN(GUU)N2 74 nt4.64□□□□□ -1.67
SSN8P47821 tN(GUU)O1tN(GUU)O1 74 nt4.64□□□□□ -1.67
SSN8P47821 tN(GUU)O2tN(GUU)O2 74 nt4.64□□□□□ -1.67
SSN8P47821 tN(GUU)PtN(GUU)P 74 nt4.64□□□□□ -1.67
SSN8P47821 HSX1tR(CCU)J 72 nt4.64□□□□□ -1.67
SSN8P47821 VMA16YHR026W 642 nt4.64□□□□□ -1.67
SSN8P47821 MNN11YJL183W 1269 nt4.64□□□□□ -1.67
SSN8P47821 ADD66YKL206C 804 nt4.64□□□□□ -1.67
SSN8P47821 ECM1YAL059W 639 nt4.64□□□□□ -1.67
SSN8P47821 CPR6YLR216C 1116 nt4.64□□□□□ -1.67
SSN8P47821 PEX12YMR026C 1200 nt4.64□□□□□ -1.67
SSN8P47821 MDM12YOL009C 816 nt4.64□□□□□ -1.67
SSN8P47821 YOR292CYOR292C 930 nt4.64□□□□□ -1.67
SSN8P47821 CAR1YPL111W 1002 nt4.64□□□□□ -1.67
SSN8P47821 CBP3YPL215W 1008 nt4.64□□□□□ -1.67
SSN8P47821 ARR1YPR199C 885 nt4.64□□□□□ -1.67
SSN8P47821 DED81YHR019C 1665 nt4.64□□□□□ -1.67
SSN8P47821 SIS2YKR072C 1689 nt4.64□□□□□ -1.67
SSN8P47821 ATG1YGL180W 2694 nt4.63□□□□□ -1.67
SSN8P47821 YTA12YMR089C 2478 nt4.63□□□□□ -1.67
SSN8P47821 snR57snR57 88 nt4.63□□□□□ -1.67
SSN8P47821 INO2YDR123C 915 nt4.63□□□□□ -1.67
SSN8P47821 YLL059CYLL059C 507 nt4.63□□□□□ -1.67
SSN8P47821 GTR1YML121W 933 nt4.63□□□□□ -1.67
SSN8P47821 YNR075C-AYNR075C-A 93 nt4.63□□□□□ -1.67
SSN8P47821 YBR056C-BYBR056C-B 159 nt4.63□□□□□ -1.67
SSN8P47821 snR17bsnR17b 332 nt4.63□□□□□ -1.67
SSN8P47821 MRPL36YBR122C 534 nt4.63□□□□□ -1.67
SSN8P47821 HRP1YOL123W 1605 nt4.63□□□□□ -1.67
SSN8P47821 BRF1YGR246C 1791 nt4.63□□□□□ -1.67
SSN8P47821 MAD3YJL013C 1548 nt4.62□□□□□ -1.67
SSN8P47821 MCM4YPR019W 2802 nt4.62□□□□□ -1.67
SSN8P47821 YCR097W-AYCR097W-A 267 nt4.62□□□□□ -1.67
SSN8P47821 YDL034WYDL034W 345 nt4.62□□□□□ -1.67
SSN8P47821 YDL119CYDL119C 924 nt4.62□□□□□ -1.67
SSN8P47821 AAD4YDL243C 990 nt4.62□□□□□ -1.67
SSN8P47821 LYS5YGL154C 819 nt4.62□□□□□ -1.67
SSN8P47821 EDC1YGL222C 528 nt4.62□□□□□ -1.67
SSN8P47821 YGR011WYGR011W 327 nt4.62□□□□□ -1.67
SSN8P47821 VTA1YLR181C 993 nt4.62□□□□□ -1.67
SSN8P47821 YLR402WYLR402W 192 nt4.62□□□□□ -1.67
SSN8P47821 YGP1YNL160W 1065 nt4.62□□□□□ -1.67
Retrieved 100 of 7,029 protein–RNA pairs in 9.3 ms