Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Sox6P40645 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC19.16■□□□□ 0.66
Sox6P40645 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Sox6P40645 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Sox6P40645 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC19.15■□□□□ 0.66
Sox6P40645 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Sox6P40645 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Sox6P40645 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Sox6P40645 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Sox6P40645 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
Sox6P40645 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Sox6P40645 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Sox6P40645 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Sox6P40645 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Sox6P40645 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Sox6P40645 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC19.14■□□□□ 0.65
Sox6P40645 Gm43566-201ENSMUST00000196851 808 ntBASIC19.14■□□□□ 0.65
Sox6P40645 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Sox6P40645 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Sox6P40645 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Sox6P40645 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Sox6P40645 Nsd1-206ENSMUST00000224918 1001 ntBASIC19.13■□□□□ 0.65
Sox6P40645 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Sox6P40645 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC19.13■□□□□ 0.65
Sox6P40645 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Sox6P40645 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Sox6P40645 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Sox6P40645 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Sox6P40645 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Sox6P40645 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Sox6P40645 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Sox6P40645 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Sox6P40645 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Sox6P40645 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Sox6P40645 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Sox6P40645 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Sox6P40645 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Sox6P40645 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Sox6P40645 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Sox6P40645 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Sox6P40645 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Sox6P40645 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC19.11■□□□□ 0.65
Sox6P40645 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC19.11■□□□□ 0.65
Sox6P40645 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Sox6P40645 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC19.11■□□□□ 0.65
Sox6P40645 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Sox6P40645 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Sox6P40645 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Sox6P40645 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Sox6P40645 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Sox6P40645 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Sox6P40645 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Sox6P40645 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Sox6P40645 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Sox6P40645 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Sox6P40645 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Sox6P40645 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Sox6P40645 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Sox6P40645 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Sox6P40645 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Sox6P40645 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Sox6P40645 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Sox6P40645 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Sox6P40645 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Sox6P40645 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Sox6P40645 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Sox6P40645 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC19.09■□□□□ 0.65
Sox6P40645 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Sox6P40645 Iqck-206ENSMUST00000208658 2891 ntBASIC19.09■□□□□ 0.65
Sox6P40645 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC19.08■□□□□ 0.65
Sox6P40645 Gm13238-201ENSMUST00000117655 780 ntBASIC19.08■□□□□ 0.64
Sox6P40645 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
Sox6P40645 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Sox6P40645 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Sox6P40645 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Sox6P40645 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Sox6P40645 Gm34220-201ENSMUST00000223001 2709 ntBASIC19.08■□□□□ 0.64
Sox6P40645 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
Sox6P40645 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
Sox6P40645 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Sox6P40645 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC19.07■□□□□ 0.64
Sox6P40645 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC19.07■□□□□ 0.64
Sox6P40645 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Sox6P40645 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Sox6P40645 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Sox6P40645 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Sox6P40645 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Sox6P40645 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Sox6P40645 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Sox6P40645 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Sox6P40645 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
Sox6P40645 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC19.06■□□□□ 0.64
Sox6P40645 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Sox6P40645 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC19.06■□□□□ 0.64
Sox6P40645 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Sox6P40645 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Sox6P40645 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Sox6P40645 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Sox6P40645 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Sox6P40645 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms