Protein–RNA interactions for Protein: P37088

SCNN1A, Amiloride-sensitive sodium channel subunit alpha, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1AP37088 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC23.95■■□□□ 1.42
SCNN1AP37088 CLTA-210ENST00000540080 989 ntTSL 2 BASIC23.95■■□□□ 1.42
SCNN1AP37088 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC23.95■■□□□ 1.42
SCNN1AP37088 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC23.95■■□□□ 1.42
SCNN1AP37088 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
SCNN1AP37088 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
SCNN1AP37088 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
SCNN1AP37088 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC23.94■■□□□ 1.42
SCNN1AP37088 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC23.94■■□□□ 1.42
SCNN1AP37088 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
SCNN1AP37088 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
SCNN1AP37088 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
SCNN1AP37088 HES6-204ENST00000409182 863 ntTSL 2 BASIC23.94■■□□□ 1.42
SCNN1AP37088 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC23.94■■□□□ 1.42
SCNN1AP37088 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC23.94■■□□□ 1.42
SCNN1AP37088 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC23.94■■□□□ 1.42
SCNN1AP37088 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
SCNN1AP37088 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
SCNN1AP37088 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC23.93■■□□□ 1.42
SCNN1AP37088 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
SCNN1AP37088 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC23.93■■□□□ 1.42
SCNN1AP37088 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
SCNN1AP37088 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC23.93■■□□□ 1.42
SCNN1AP37088 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC23.93■■□□□ 1.42
SCNN1AP37088 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC23.93■■□□□ 1.42
SCNN1AP37088 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC23.93■■□□□ 1.42
SCNN1AP37088 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
SCNN1AP37088 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC23.93■■□□□ 1.42
SCNN1AP37088 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC23.93■■□□□ 1.42
SCNN1AP37088 ABCB10P4-201ENST00000566803 2184 ntBASIC23.92■■□□□ 1.42
SCNN1AP37088 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
SCNN1AP37088 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC23.92■■□□□ 1.42
SCNN1AP37088 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC23.92■■□□□ 1.42
SCNN1AP37088 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC23.92■■□□□ 1.42
SCNN1AP37088 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC23.92■■□□□ 1.42
SCNN1AP37088 OR2A1-AS1-204ENST00000470435 602 ntBASIC23.92■■□□□ 1.42
SCNN1AP37088 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
SCNN1AP37088 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC23.92■■□□□ 1.42
SCNN1AP37088 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
SCNN1AP37088 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
SCNN1AP37088 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
SCNN1AP37088 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
SCNN1AP37088 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC23.91■■□□□ 1.42
SCNN1AP37088 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
SCNN1AP37088 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC23.91■■□□□ 1.42
SCNN1AP37088 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
SCNN1AP37088 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC23.91■■□□□ 1.42
SCNN1AP37088 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
SCNN1AP37088 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC23.9■■□□□ 1.42
SCNN1AP37088 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC23.9■■□□□ 1.42
SCNN1AP37088 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC23.9■■□□□ 1.42
SCNN1AP37088 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC23.9■■□□□ 1.42
SCNN1AP37088 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC23.9■■□□□ 1.42
SCNN1AP37088 TRIR-205ENST00000592273 783 ntTSL 3 BASIC23.9■■□□□ 1.42
SCNN1AP37088 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC23.9■■□□□ 1.42
SCNN1AP37088 REST-206ENST00000612429 1376 ntTSL 5 BASIC23.9■■□□□ 1.42
SCNN1AP37088 REST-207ENST00000616975 1370 ntTSL 5 BASIC23.9■■□□□ 1.42
SCNN1AP37088 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
SCNN1AP37088 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
SCNN1AP37088 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC23.9■■□□□ 1.42
SCNN1AP37088 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC23.89■■□□□ 1.42
SCNN1AP37088 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
SCNN1AP37088 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
SCNN1AP37088 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC23.89■■□□□ 1.41
SCNN1AP37088 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
SCNN1AP37088 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC23.89■■□□□ 1.41
SCNN1AP37088 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC23.89■■□□□ 1.41
SCNN1AP37088 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC23.89■■□□□ 1.41
SCNN1AP37088 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
SCNN1AP37088 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
SCNN1AP37088 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
SCNN1AP37088 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
SCNN1AP37088 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC23.88■■□□□ 1.41
SCNN1AP37088 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
SCNN1AP37088 CREM-229ENST00000474362 1030 ntTSL 2 BASIC23.88■■□□□ 1.41
SCNN1AP37088 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC23.88■■□□□ 1.41
SCNN1AP37088 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
SCNN1AP37088 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
SCNN1AP37088 THRA-202ENST00000394121 2260 ntTSL 2 BASIC23.87■■□□□ 1.41
SCNN1AP37088 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC23.87■■□□□ 1.41
SCNN1AP37088 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
SCNN1AP37088 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC23.87■■□□□ 1.41
SCNN1AP37088 CLTA-206ENST00000466396 695 ntTSL 2 BASIC23.87■■□□□ 1.41
SCNN1AP37088 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
SCNN1AP37088 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
SCNN1AP37088 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC23.87■■□□□ 1.41
SCNN1AP37088 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
SCNN1AP37088 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
SCNN1AP37088 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
SCNN1AP37088 GUSBP5-201ENST00000418136 578 ntBASIC23.86■■□□□ 1.41
SCNN1AP37088 MTDHP2-201ENST00000601468 714 ntBASIC23.86■■□□□ 1.41
SCNN1AP37088 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
SCNN1AP37088 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
SCNN1AP37088 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC23.85■■□□□ 1.41
SCNN1AP37088 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
SCNN1AP37088 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC23.85■■□□□ 1.41
SCNN1AP37088 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC23.85■■□□□ 1.41
SCNN1AP37088 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC23.84■■□□□ 1.41
SCNN1AP37088 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
SCNN1AP37088 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 10.2 ms