Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
CKS2P33552 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CKS2P33552 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CKS2P33552 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CKS2P33552 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC16.78■□□□□ 0.28
CKS2P33552 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CKS2P33552 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CKS2P33552 LINC00526-201ENST00000581067 1875 ntBASIC16.78■□□□□ 0.28
CKS2P33552 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC16.77■□□□□ 0.28
CKS2P33552 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CKS2P33552 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC16.77■□□□□ 0.28
CKS2P33552 AC127496.7-201ENST00000625110 1798 ntBASIC16.77■□□□□ 0.28
CKS2P33552 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
CKS2P33552 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
CKS2P33552 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
CKS2P33552 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
CKS2P33552 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
CKS2P33552 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CKS2P33552 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
CKS2P33552 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CKS2P33552 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
CKS2P33552 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
CKS2P33552 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC16.77■□□□□ 0.28
CKS2P33552 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CKS2P33552 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
CKS2P33552 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC16.77■□□□□ 0.27
CKS2P33552 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC16.77■□□□□ 0.27
CKS2P33552 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CKS2P33552 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
CKS2P33552 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CKS2P33552 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
CKS2P33552 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC16.77■□□□□ 0.27
CKS2P33552 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CKS2P33552 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CKS2P33552 C1orf229-201ENST00000623686 2258 ntBASIC16.76■□□□□ 0.27
CKS2P33552 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
CKS2P33552 EFS-203ENST00000429593 2610 ntTSL 2 BASIC16.76■□□□□ 0.27
CKS2P33552 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
CKS2P33552 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
CKS2P33552 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC16.76■□□□□ 0.27
CKS2P33552 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CKS2P33552 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
CKS2P33552 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
CKS2P33552 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CKS2P33552 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CKS2P33552 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CKS2P33552 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CKS2P33552 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CKS2P33552 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CKS2P33552 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC16.75■□□□□ 0.27
CKS2P33552 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CKS2P33552 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC16.75■□□□□ 0.27
CKS2P33552 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC16.75■□□□□ 0.27
CKS2P33552 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CKS2P33552 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CKS2P33552 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CKS2P33552 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CKS2P33552 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CKS2P33552 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CKS2P33552 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CKS2P33552 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CKS2P33552 GUSBP5-202ENST00000510805 1989 ntBASIC16.75■□□□□ 0.27
CKS2P33552 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
CKS2P33552 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CKS2P33552 AC137767.1-201ENST00000602918 1920 ntBASIC16.74■□□□□ 0.27
CKS2P33552 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC16.74■□□□□ 0.27
CKS2P33552 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CKS2P33552 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CKS2P33552 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC16.74■□□□□ 0.27
CKS2P33552 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
CKS2P33552 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CKS2P33552 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CKS2P33552 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CKS2P33552 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC16.74■□□□□ 0.27
CKS2P33552 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CKS2P33552 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CKS2P33552 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CKS2P33552 AC126177.7-201ENST00000547904 679 ntBASIC16.74■□□□□ 0.27
CKS2P33552 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CKS2P33552 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
CKS2P33552 ANOS2P-203ENST00000472227 1816 ntBASIC16.74■□□□□ 0.27
CKS2P33552 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC16.74■□□□□ 0.27
CKS2P33552 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CKS2P33552 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CKS2P33552 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CKS2P33552 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC16.73■□□□□ 0.27
CKS2P33552 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CKS2P33552 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
CKS2P33552 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CKS2P33552 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC16.73■□□□□ 0.27
CKS2P33552 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CKS2P33552 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CKS2P33552 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CKS2P33552 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CKS2P33552 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
CKS2P33552 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC16.73■□□□□ 0.27
CKS2P33552 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC16.72■□□□□ 0.27
CKS2P33552 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CKS2P33552 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CKS2P33552 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 16 ms