Protein–RNA interactions for Protein: O15534

PER1, Period circadian protein homolog 1, humanhuman

Predicted RBP Predictions only

Length 1,290 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER1O15534 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.61
PER1O15534 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
PER1O15534 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
PER1O15534 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
PER1O15534 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC31.37■■■□□ 2.61
PER1O15534 AC010997.5-201ENST00000609182 354 ntBASIC31.37■■■□□ 2.61
PER1O15534 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC31.37■■■□□ 2.61
PER1O15534 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC31.37■■■□□ 2.61
PER1O15534 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
PER1O15534 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
PER1O15534 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
PER1O15534 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
PER1O15534 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
PER1O15534 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
PER1O15534 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
PER1O15534 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
PER1O15534 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC31.36■■■□□ 2.61
PER1O15534 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC31.36■■■□□ 2.61
PER1O15534 EXOG-217ENST00000630638 197 ntTSL 5 BASIC31.36■■■□□ 2.61
PER1O15534 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
PER1O15534 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
PER1O15534 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
PER1O15534 AL356441.2-201ENST00000443009 864 ntBASIC31.35■■■□□ 2.61
PER1O15534 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC31.35■■■□□ 2.61
PER1O15534 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC31.35■■■□□ 2.61
PER1O15534 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC31.34■■■□□ 2.61
PER1O15534 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
PER1O15534 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC31.34■■■□□ 2.61
PER1O15534 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC31.34■■■□□ 2.61
PER1O15534 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC31.34■■■□□ 2.61
PER1O15534 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC31.34■■■□□ 2.61
PER1O15534 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC31.34■■■□□ 2.61
PER1O15534 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC31.33■■■□□ 2.61
PER1O15534 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
PER1O15534 ALDH1A3-203ENST00000557963 1670 ntBASIC31.33■■■□□ 2.61
PER1O15534 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
PER1O15534 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC31.33■■■□□ 2.61
PER1O15534 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
PER1O15534 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
PER1O15534 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
PER1O15534 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC31.32■■■□□ 2.61
PER1O15534 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
PER1O15534 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC31.32■■■□□ 2.6
PER1O15534 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
PER1O15534 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC31.31■■■□□ 2.6
PER1O15534 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC31.31■■■□□ 2.6
PER1O15534 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC31.31■■■□□ 2.6
PER1O15534 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC31.31■■■□□ 2.6
PER1O15534 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC31.31■■■□□ 2.6
PER1O15534 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC31.31■■■□□ 2.6
PER1O15534 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC31.31■■■□□ 2.6
PER1O15534 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC31.31■■■□□ 2.6
PER1O15534 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC31.31■■■□□ 2.6
PER1O15534 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC31.3■■■□□ 2.6
PER1O15534 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC31.3■■■□□ 2.6
PER1O15534 ABCB10P4-201ENST00000566803 2184 ntBASIC31.3■■■□□ 2.6
PER1O15534 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
PER1O15534 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC31.3■■■□□ 2.6
PER1O15534 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
PER1O15534 MTDHP2-201ENST00000601468 714 ntBASIC31.3■■■□□ 2.6
PER1O15534 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC31.3■■■□□ 2.6
PER1O15534 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
PER1O15534 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
PER1O15534 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC31.29■■■□□ 2.6
PER1O15534 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
PER1O15534 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
PER1O15534 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC31.29■■■□□ 2.6
PER1O15534 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC31.29■■■□□ 2.6
PER1O15534 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
PER1O15534 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC31.29■■■□□ 2.6
PER1O15534 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
PER1O15534 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
PER1O15534 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC31.29■■■□□ 2.6
PER1O15534 CD72-202ENST00000378430 585 ntTSL 3 BASIC31.28■■■□□ 2.6
PER1O15534 KRT16P3-201ENST00000439127 1283 ntBASIC31.28■■■□□ 2.6
PER1O15534 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
PER1O15534 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
PER1O15534 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC31.27■■■□□ 2.6
PER1O15534 GRAMD4P7-201ENST00000578182 1232 ntBASIC31.27■■■□□ 2.6
PER1O15534 MIR6724-1-201ENST00000616420 92 ntBASIC31.27■■■□□ 2.6
PER1O15534 MIR6724-2-201ENST00000616483 92 ntBASIC31.27■■■□□ 2.6
PER1O15534 MIR6724-4-201ENST00000617390 92 ntBASIC31.27■■■□□ 2.6
PER1O15534 MIR6724-3-201ENST00000622482 92 ntBASIC31.27■■■□□ 2.6
PER1O15534 REST-206ENST00000612429 1376 ntTSL 5 BASIC31.27■■■□□ 2.6
PER1O15534 REST-207ENST00000616975 1370 ntTSL 5 BASIC31.27■■■□□ 2.6
PER1O15534 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
PER1O15534 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.6
PER1O15534 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.6
PER1O15534 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC31.26■■■□□ 2.59
PER1O15534 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
PER1O15534 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC31.26■■■□□ 2.59
PER1O15534 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC31.26■■■□□ 2.59
PER1O15534 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC31.25■■■□□ 2.59
PER1O15534 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
PER1O15534 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
PER1O15534 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
PER1O15534 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
PER1O15534 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC31.24■■■□□ 2.59
PER1O15534 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC31.24■■■□□ 2.59
PER1O15534 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC31.24■■■□□ 2.59
Retrieved 100 of 98,524 protein–RNA pairs in 14.2 ms