Protein–RNA interactions for Protein: A0PK11

CLRN2, Clarin-2, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN2A0PK11 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC27.41■■□□□ 1.98
CLRN2A0PK11 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC27.41■■□□□ 1.98
CLRN2A0PK11 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC27.41■■□□□ 1.98
CLRN2A0PK11 AC011298.3-201ENST00000615796 283 ntBASIC27.41■■□□□ 1.98
CLRN2A0PK11 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC27.41■■□□□ 1.98
CLRN2A0PK11 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC27.41■■□□□ 1.98
CLRN2A0PK11 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
CLRN2A0PK11 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC27.4■■□□□ 1.98
CLRN2A0PK11 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC27.4■■□□□ 1.98
CLRN2A0PK11 AC099791.1-201ENST00000416440 715 ntBASIC27.4■■□□□ 1.98
CLRN2A0PK11 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC27.4■■□□□ 1.98
CLRN2A0PK11 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC27.4■■□□□ 1.98
CLRN2A0PK11 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC27.4■■□□□ 1.98
CLRN2A0PK11 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
CLRN2A0PK11 AL022069.1-201ENST00000568025 1636 ntBASIC27.39■■□□□ 1.98
CLRN2A0PK11 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC27.39■■□□□ 1.98
CLRN2A0PK11 AC006455.2-201ENST00000429931 906 ntBASIC27.39■■□□□ 1.98
CLRN2A0PK11 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC27.39■■□□□ 1.98
CLRN2A0PK11 PLD4-205ENST00000553861 667 ntTSL 2 BASIC27.39■■□□□ 1.98
CLRN2A0PK11 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC27.39■■□□□ 1.98
CLRN2A0PK11 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC27.39■■□□□ 1.98
CLRN2A0PK11 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
CLRN2A0PK11 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.97
CLRN2A0PK11 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC27.39■■□□□ 1.97
CLRN2A0PK11 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
CLRN2A0PK11 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
CLRN2A0PK11 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
CLRN2A0PK11 AL162430.1-201ENST00000480705 870 ntBASIC27.38■■□□□ 1.97
CLRN2A0PK11 MIR6089-201ENST00000616698 64 ntBASIC27.38■■□□□ 1.97
CLRN2A0PK11 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC27.38■■□□□ 1.97
CLRN2A0PK11 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC27.38■■□□□ 1.97
CLRN2A0PK11 C17orf82-201ENST00000623772 1530 ntBASIC27.37■■□□□ 1.97
CLRN2A0PK11 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC27.37■■□□□ 1.97
CLRN2A0PK11 AL138724.1-201ENST00000606771 1088 ntBASIC27.37■■□□□ 1.97
CLRN2A0PK11 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC27.37■■□□□ 1.97
CLRN2A0PK11 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
CLRN2A0PK11 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
CLRN2A0PK11 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC27.36■■□□□ 1.97
CLRN2A0PK11 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC27.36■■□□□ 1.97
CLRN2A0PK11 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC27.36■■□□□ 1.97
CLRN2A0PK11 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC27.36■■□□□ 1.97
CLRN2A0PK11 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC27.36■■□□□ 1.97
CLRN2A0PK11 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC27.36■■□□□ 1.97
CLRN2A0PK11 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
CLRN2A0PK11 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC27.35■■□□□ 1.97
CLRN2A0PK11 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC27.35■■□□□ 1.97
CLRN2A0PK11 HES6-206ENST00000409574 738 ntTSL 2 BASIC27.35■■□□□ 1.97
CLRN2A0PK11 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC27.35■■□□□ 1.97
CLRN2A0PK11 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
CLRN2A0PK11 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
CLRN2A0PK11 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC27.34■■□□□ 1.97
CLRN2A0PK11 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
CLRN2A0PK11 CEBPA-AS1-201ENST00000592982 2198 ntBASIC27.34■■□□□ 1.97
CLRN2A0PK11 IRS3P-201ENST00000223076 1006 ntBASIC27.34■■□□□ 1.97
CLRN2A0PK11 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
CLRN2A0PK11 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
CLRN2A0PK11 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC27.34■■□□□ 1.97
CLRN2A0PK11 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC27.34■■□□□ 1.97
CLRN2A0PK11 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC27.34■■□□□ 1.97
CLRN2A0PK11 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC27.33■■□□□ 1.97
CLRN2A0PK11 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
CLRN2A0PK11 RHOF-204ENST00000537265 699 ntTSL 2 BASIC27.33■■□□□ 1.97
CLRN2A0PK11 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC27.33■■□□□ 1.97
CLRN2A0PK11 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC27.33■■□□□ 1.97
CLRN2A0PK11 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
CLRN2A0PK11 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.96
CLRN2A0PK11 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC27.33■■□□□ 1.96
CLRN2A0PK11 LSR-205ENST00000427250 1606 ntTSL 2 BASIC27.32■■□□□ 1.96
CLRN2A0PK11 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
CLRN2A0PK11 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC27.31■■□□□ 1.96
CLRN2A0PK11 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC27.31■■□□□ 1.96
CLRN2A0PK11 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
CLRN2A0PK11 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC27.31■■□□□ 1.96
CLRN2A0PK11 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
CLRN2A0PK11 JTB-203ENST00000368589 1216 ntTSL 2 BASIC27.31■■□□□ 1.96
CLRN2A0PK11 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC27.31■■□□□ 1.96
CLRN2A0PK11 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC27.31■■□□□ 1.96
CLRN2A0PK11 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
CLRN2A0PK11 AC136469.2-201ENST00000623944 1028 ntBASIC27.31■■□□□ 1.96
CLRN2A0PK11 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC27.31■■□□□ 1.96
CLRN2A0PK11 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC27.3■■□□□ 1.96
CLRN2A0PK11 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC27.3■■□□□ 1.96
CLRN2A0PK11 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
CLRN2A0PK11 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
CLRN2A0PK11 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC27.3■■□□□ 1.96
CLRN2A0PK11 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC27.3■■□□□ 1.96
CLRN2A0PK11 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
CLRN2A0PK11 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
CLRN2A0PK11 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC27.3■■□□□ 1.96
CLRN2A0PK11 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
CLRN2A0PK11 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC27.29■■□□□ 1.96
CLRN2A0PK11 AC241377.3-202ENST00000626088 1088 ntBASIC27.29■■□□□ 1.96
CLRN2A0PK11 AC241585.3-202ENST00000628937 1088 ntBASIC27.29■■□□□ 1.96
CLRN2A0PK11 AC245100.8-202ENST00000629247 1058 ntBASIC27.29■■□□□ 1.96
CLRN2A0PK11 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC27.29■■□□□ 1.96
CLRN2A0PK11 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC27.29■■□□□ 1.96
CLRN2A0PK11 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
CLRN2A0PK11 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC27.28■■□□□ 1.96
CLRN2A0PK11 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
CLRN2A0PK11 MIR3181-201ENST00000578512 73 ntBASIC27.28■■□□□ 1.96
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms