Protein–RNA interactions for Protein: A0A0C4DH59

TRBV5-4, T-cell receptor beta variable 5-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-4A0A0C4DH59 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC22.68■■□□□ 1.22
TRBV5-4A0A0C4DH59 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
TRBV5-4A0A0C4DH59 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
TRBV5-4A0A0C4DH59 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC22.67■■□□□ 1.22
TRBV5-4A0A0C4DH59 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
TRBV5-4A0A0C4DH59 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC22.67■■□□□ 1.22
TRBV5-4A0A0C4DH59 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
TRBV5-4A0A0C4DH59 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC22.67■■□□□ 1.22
TRBV5-4A0A0C4DH59 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC22.67■■□□□ 1.22
TRBV5-4A0A0C4DH59 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
TRBV5-4A0A0C4DH59 OR2A1-AS1-204ENST00000470435 602 ntBASIC22.67■■□□□ 1.22
TRBV5-4A0A0C4DH59 MIR6722-201ENST00000617286 78 ntBASIC22.67■■□□□ 1.22
TRBV5-4A0A0C4DH59 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC22.67■■□□□ 1.22
TRBV5-4A0A0C4DH59 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC22.67■■□□□ 1.22
TRBV5-4A0A0C4DH59 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
TRBV5-4A0A0C4DH59 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
TRBV5-4A0A0C4DH59 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
TRBV5-4A0A0C4DH59 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
TRBV5-4A0A0C4DH59 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
TRBV5-4A0A0C4DH59 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC22.66■■□□□ 1.22
TRBV5-4A0A0C4DH59 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
TRBV5-4A0A0C4DH59 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC22.66■■□□□ 1.22
TRBV5-4A0A0C4DH59 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC22.66■■□□□ 1.22
TRBV5-4A0A0C4DH59 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC22.66■■□□□ 1.22
TRBV5-4A0A0C4DH59 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC22.66■■□□□ 1.22
TRBV5-4A0A0C4DH59 THRA-202ENST00000394121 2260 ntTSL 2 BASIC22.66■■□□□ 1.22
TRBV5-4A0A0C4DH59 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC22.66■■□□□ 1.22
TRBV5-4A0A0C4DH59 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
TRBV5-4A0A0C4DH59 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC22.66■■□□□ 1.22
TRBV5-4A0A0C4DH59 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
TRBV5-4A0A0C4DH59 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
TRBV5-4A0A0C4DH59 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
TRBV5-4A0A0C4DH59 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC22.65■■□□□ 1.22
TRBV5-4A0A0C4DH59 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC22.65■■□□□ 1.22
TRBV5-4A0A0C4DH59 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC22.65■■□□□ 1.22
TRBV5-4A0A0C4DH59 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC22.65■■□□□ 1.22
TRBV5-4A0A0C4DH59 HES6-204ENST00000409182 863 ntTSL 2 BASIC22.65■■□□□ 1.22
TRBV5-4A0A0C4DH59 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC22.65■■□□□ 1.22
TRBV5-4A0A0C4DH59 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC22.65■■□□□ 1.22
TRBV5-4A0A0C4DH59 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
TRBV5-4A0A0C4DH59 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
TRBV5-4A0A0C4DH59 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
TRBV5-4A0A0C4DH59 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
TRBV5-4A0A0C4DH59 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
TRBV5-4A0A0C4DH59 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC22.64■■□□□ 1.21
TRBV5-4A0A0C4DH59 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC22.64■■□□□ 1.21
TRBV5-4A0A0C4DH59 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
TRBV5-4A0A0C4DH59 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.21
TRBV5-4A0A0C4DH59 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC22.64■■□□□ 1.21
TRBV5-4A0A0C4DH59 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC22.64■■□□□ 1.21
TRBV5-4A0A0C4DH59 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC22.63■■□□□ 1.21
TRBV5-4A0A0C4DH59 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
TRBV5-4A0A0C4DH59 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
TRBV5-4A0A0C4DH59 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC22.63■■□□□ 1.21
TRBV5-4A0A0C4DH59 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
TRBV5-4A0A0C4DH59 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
TRBV5-4A0A0C4DH59 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
TRBV5-4A0A0C4DH59 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
TRBV5-4A0A0C4DH59 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
TRBV5-4A0A0C4DH59 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
TRBV5-4A0A0C4DH59 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
TRBV5-4A0A0C4DH59 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC22.62■■□□□ 1.21
TRBV5-4A0A0C4DH59 CLTA-206ENST00000466396 695 ntTSL 2 BASIC22.62■■□□□ 1.21
TRBV5-4A0A0C4DH59 CREM-229ENST00000474362 1030 ntTSL 2 BASIC22.62■■□□□ 1.21
TRBV5-4A0A0C4DH59 TRIR-205ENST00000592273 783 ntTSL 3 BASIC22.62■■□□□ 1.21
TRBV5-4A0A0C4DH59 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC22.62■■□□□ 1.21
TRBV5-4A0A0C4DH59 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC22.62■■□□□ 1.21
TRBV5-4A0A0C4DH59 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC22.62■■□□□ 1.21
TRBV5-4A0A0C4DH59 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC22.61■■□□□ 1.21
TRBV5-4A0A0C4DH59 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
TRBV5-4A0A0C4DH59 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
TRBV5-4A0A0C4DH59 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
TRBV5-4A0A0C4DH59 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC22.61■■□□□ 1.21
TRBV5-4A0A0C4DH59 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
TRBV5-4A0A0C4DH59 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC22.6■■□□□ 1.21
TRBV5-4A0A0C4DH59 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC22.6■■□□□ 1.21
TRBV5-4A0A0C4DH59 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC22.6■■□□□ 1.21
TRBV5-4A0A0C4DH59 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
TRBV5-4A0A0C4DH59 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC22.6■■□□□ 1.21
TRBV5-4A0A0C4DH59 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
TRBV5-4A0A0C4DH59 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
TRBV5-4A0A0C4DH59 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC22.6■■□□□ 1.21
TRBV5-4A0A0C4DH59 GUSBP5-201ENST00000418136 578 ntBASIC22.6■■□□□ 1.21
TRBV5-4A0A0C4DH59 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC22.6■■□□□ 1.21
TRBV5-4A0A0C4DH59 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC22.6■■□□□ 1.21
TRBV5-4A0A0C4DH59 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
TRBV5-4A0A0C4DH59 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
TRBV5-4A0A0C4DH59 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
TRBV5-4A0A0C4DH59 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
TRBV5-4A0A0C4DH59 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC22.59■■□□□ 1.21
TRBV5-4A0A0C4DH59 UNC93B8-201ENST00000511903 705 ntBASIC22.59■■□□□ 1.21
TRBV5-4A0A0C4DH59 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
TRBV5-4A0A0C4DH59 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
TRBV5-4A0A0C4DH59 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC22.59■■□□□ 1.21
TRBV5-4A0A0C4DH59 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
TRBV5-4A0A0C4DH59 REST-206ENST00000612429 1376 ntTSL 5 BASIC22.59■■□□□ 1.21
TRBV5-4A0A0C4DH59 REST-207ENST00000616975 1370 ntTSL 5 BASIC22.59■■□□□ 1.21
TRBV5-4A0A0C4DH59 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
TRBV5-4A0A0C4DH59 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
TRBV5-4A0A0C4DH59 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms