Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC5.06□□□□□ -1.6
KRTAP4-3Q9BYR4 AC073575.1-201ENST00000551125 596 ntTSL 3 BASIC5.06□□□□□ -1.6
KRTAP4-3Q9BYR4 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
KRTAP4-3Q9BYR4 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC5.06□□□□□ -1.6
KRTAP4-3Q9BYR4 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
KRTAP4-3Q9BYR4 AL160314.3-201ENST00000556041 767 ntBASIC5.06□□□□□ -1.6
KRTAP4-3Q9BYR4 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
KRTAP4-3Q9BYR4 AC079328.1-201ENST00000560358 952 ntBASIC5.06□□□□□ -1.6
KRTAP4-3Q9BYR4 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC5.06□□□□□ -1.6
KRTAP4-3Q9BYR4 FGFR3P5-201ENST00000564496 886 ntBASIC5.06□□□□□ -1.6
KRTAP4-3Q9BYR4 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
KRTAP4-3Q9BYR4 RN7SL574P-201ENST00000581512 297 ntBASIC5.06□□□□□ -1.6
KRTAP4-3Q9BYR4 RPS15-202ENST00000585665 467 ntTSL 3 BASIC5.06□□□□□ -1.6
KRTAP4-3Q9BYR4 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC5.06□□□□□ -1.6
KRTAP4-3Q9BYR4 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC5.06□□□□□ -1.6
KRTAP4-3Q9BYR4 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
KRTAP4-3Q9BYR4 KLK3-207ENST00000595952 969 ntTSL 3 BASIC5.06□□□□□ -1.6
KRTAP4-3Q9BYR4 AC016629.1-201ENST00000596579 586 ntBASIC5.06□□□□□ -1.6
KRTAP4-3Q9BYR4 AC009955.4-201ENST00000597192 544 ntBASIC5.06□□□□□ -1.6
KRTAP4-3Q9BYR4 KLK11-210ENST00000600362 759 ntTSL 3 BASIC5.06□□□□□ -1.6
KRTAP4-3Q9BYR4 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC5.06□□□□□ -1.6
KRTAP4-3Q9BYR4 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC5.06□□□□□ -1.6
KRTAP4-3Q9BYR4 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC5.06□□□□□ -1.6
KRTAP4-3Q9BYR4 ZACNP1-201ENST00000612259 710 ntBASIC5.06□□□□□ -1.6
KRTAP4-3Q9BYR4 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC5.06□□□□□ -1.6
KRTAP4-3Q9BYR4 AC093783.1-201ENST00000612976 329 ntBASIC5.06□□□□□ -1.6
KRTAP4-3Q9BYR4 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC5.06□□□□□ -1.6
KRTAP4-3Q9BYR4 AL162426.1-201ENST00000624141 743 ntBASIC5.06□□□□□ -1.6
KRTAP4-3Q9BYR4 LINC02536-201ENST00000625799 625 ntTSL 3 BASIC5.06□□□□□ -1.6
KRTAP4-3Q9BYR4 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC5.06□□□□□ -1.6
KRTAP4-3Q9BYR4 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC5.06□□□□□ -1.6
KRTAP4-3Q9BYR4 F11R-206ENST00000621309 4770 ntTSL 5 BASIC5.06□□□□□ -1.6
KRTAP4-3Q9BYR4 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC5.06□□□□□ -1.6
KRTAP4-3Q9BYR4 CCDC187-203ENST00000569961 3158 ntAPPRIS P2 TSL 1 (best) BASIC5.06□□□□□ -1.6
KRTAP4-3Q9BYR4 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC5.06□□□□□ -1.6
KRTAP4-3Q9BYR4 MROH4P-201ENST00000431302 1578 ntBASIC5.06□□□□□ -1.6
KRTAP4-3Q9BYR4 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
KRTAP4-3Q9BYR4 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
KRTAP4-3Q9BYR4 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
KRTAP4-3Q9BYR4 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC5.06□□□□□ -1.6
KRTAP4-3Q9BYR4 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
KRTAP4-3Q9BYR4 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
KRTAP4-3Q9BYR4 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
KRTAP4-3Q9BYR4 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC5.06□□□□□ -1.6
KRTAP4-3Q9BYR4 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
KRTAP4-3Q9BYR4 AC126365.1-201ENST00000578585 1514 ntBASIC5.06□□□□□ -1.6
KRTAP4-3Q9BYR4 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
KRTAP4-3Q9BYR4 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC5.06□□□□□ -1.6
KRTAP4-3Q9BYR4 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC5.06□□□□□ -1.6
KRTAP4-3Q9BYR4 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
KRTAP4-3Q9BYR4 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
KRTAP4-3Q9BYR4 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC5.06□□□□□ -1.6
KRTAP4-3Q9BYR4 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
KRTAP4-3Q9BYR4 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
KRTAP4-3Q9BYR4 PARN-202ENST00000420015 2360 ntTSL 2 BASIC5.06□□□□□ -1.6
KRTAP4-3Q9BYR4 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
KRTAP4-3Q9BYR4 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
KRTAP4-3Q9BYR4 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
KRTAP4-3Q9BYR4 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
KRTAP4-3Q9BYR4 SALL4P5-201ENST00000419001 1760 ntBASIC5.06□□□□□ -1.6
KRTAP4-3Q9BYR4 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
KRTAP4-3Q9BYR4 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
KRTAP4-3Q9BYR4 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
KRTAP4-3Q9BYR4 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
KRTAP4-3Q9BYR4 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC5.06□□□□□ -1.6
KRTAP4-3Q9BYR4 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
KRTAP4-3Q9BYR4 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC5.06□□□□□ -1.6
KRTAP4-3Q9BYR4 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
KRTAP4-3Q9BYR4 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
KRTAP4-3Q9BYR4 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
KRTAP4-3Q9BYR4 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
KRTAP4-3Q9BYR4 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
KRTAP4-3Q9BYR4 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC5.06□□□□□ -1.6
KRTAP4-3Q9BYR4 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
KRTAP4-3Q9BYR4 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
KRTAP4-3Q9BYR4 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC5.06□□□□□ -1.6
KRTAP4-3Q9BYR4 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC5.06□□□□□ -1.6
KRTAP4-3Q9BYR4 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
KRTAP4-3Q9BYR4 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
KRTAP4-3Q9BYR4 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
KRTAP4-3Q9BYR4 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC5.05□□□□□ -1.6
KRTAP4-3Q9BYR4 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
KRTAP4-3Q9BYR4 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
KRTAP4-3Q9BYR4 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
KRTAP4-3Q9BYR4 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
KRTAP4-3Q9BYR4 AC093227.1-201ENST00000588040 1360 ntTSL 3 BASIC5.05□□□□□ -1.6
KRTAP4-3Q9BYR4 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC5.05□□□□□ -1.6
KRTAP4-3Q9BYR4 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC5.05□□□□□ -1.6
KRTAP4-3Q9BYR4 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
KRTAP4-3Q9BYR4 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC5.05□□□□□ -1.6
KRTAP4-3Q9BYR4 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
KRTAP4-3Q9BYR4 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
KRTAP4-3Q9BYR4 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC5.05□□□□□ -1.6
KRTAP4-3Q9BYR4 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
KRTAP4-3Q9BYR4 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC5.05□□□□□ -1.6
KRTAP4-3Q9BYR4 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
KRTAP4-3Q9BYR4 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
KRTAP4-3Q9BYR4 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC5.05□□□□□ -1.6
KRTAP4-3Q9BYR4 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
KRTAP4-3Q9BYR4 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms