Protein–RNA interactions for Protein: Q9BSR8

YIPF4, Protein YIPF4, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF4Q9BSR8 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC14.13□□□□□ -0.15
YIPF4Q9BSR8 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
YIPF4Q9BSR8 CICP4-201ENST00000447359 2812 ntBASIC14.13□□□□□ -0.15
YIPF4Q9BSR8 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
YIPF4Q9BSR8 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
YIPF4Q9BSR8 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
YIPF4Q9BSR8 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
YIPF4Q9BSR8 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
YIPF4Q9BSR8 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
YIPF4Q9BSR8 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
YIPF4Q9BSR8 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
YIPF4Q9BSR8 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC14.13□□□□□ -0.15
YIPF4Q9BSR8 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
YIPF4Q9BSR8 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
YIPF4Q9BSR8 MPV17-208ENST00000405076 603 ntTSL 5 BASIC14.13□□□□□ -0.15
YIPF4Q9BSR8 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC14.13□□□□□ -0.15
YIPF4Q9BSR8 NUS1P3-201ENST00000423502 862 ntBASIC14.13□□□□□ -0.15
YIPF4Q9BSR8 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
YIPF4Q9BSR8 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC14.13□□□□□ -0.15
YIPF4Q9BSR8 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
YIPF4Q9BSR8 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC14.13□□□□□ -0.15
YIPF4Q9BSR8 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
YIPF4Q9BSR8 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
YIPF4Q9BSR8 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
YIPF4Q9BSR8 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
YIPF4Q9BSR8 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC14.13□□□□□ -0.15
YIPF4Q9BSR8 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC14.13□□□□□ -0.15
YIPF4Q9BSR8 TMEM261P1-201ENST00000604899 340 ntBASIC14.13□□□□□ -0.15
YIPF4Q9BSR8 API5-203ENST00000455725 2257 ntTSL 2 BASIC14.13□□□□□ -0.15
YIPF4Q9BSR8 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC14.13□□□□□ -0.15
YIPF4Q9BSR8 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
YIPF4Q9BSR8 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
YIPF4Q9BSR8 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
YIPF4Q9BSR8 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC14.13□□□□□ -0.15
YIPF4Q9BSR8 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
YIPF4Q9BSR8 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
YIPF4Q9BSR8 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
YIPF4Q9BSR8 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
YIPF4Q9BSR8 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
YIPF4Q9BSR8 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC14.13□□□□□ -0.15
YIPF4Q9BSR8 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
YIPF4Q9BSR8 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
YIPF4Q9BSR8 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
YIPF4Q9BSR8 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
YIPF4Q9BSR8 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
YIPF4Q9BSR8 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
YIPF4Q9BSR8 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC14.12□□□□□ -0.15
YIPF4Q9BSR8 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
YIPF4Q9BSR8 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
YIPF4Q9BSR8 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC14.12□□□□□ -0.15
YIPF4Q9BSR8 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC14.12□□□□□ -0.15
YIPF4Q9BSR8 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC14.12□□□□□ -0.15
YIPF4Q9BSR8 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
YIPF4Q9BSR8 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC14.12□□□□□ -0.15
YIPF4Q9BSR8 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC14.12□□□□□ -0.15
YIPF4Q9BSR8 AC113367.3-201ENST00000508316 1912 ntBASIC14.12□□□□□ -0.15
YIPF4Q9BSR8 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
YIPF4Q9BSR8 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
YIPF4Q9BSR8 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
YIPF4Q9BSR8 AP001267.2-201ENST00000532619 2086 ntBASIC14.12□□□□□ -0.15
YIPF4Q9BSR8 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
YIPF4Q9BSR8 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
YIPF4Q9BSR8 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
YIPF4Q9BSR8 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
YIPF4Q9BSR8 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
YIPF4Q9BSR8 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
YIPF4Q9BSR8 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
YIPF4Q9BSR8 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
YIPF4Q9BSR8 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC14.12□□□□□ -0.15
YIPF4Q9BSR8 AL139094.1-201ENST00000405549 1188 ntBASIC14.12□□□□□ -0.15
YIPF4Q9BSR8 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
YIPF4Q9BSR8 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC14.12□□□□□ -0.15
YIPF4Q9BSR8 GIMAP3P-201ENST00000495150 836 ntBASIC14.12□□□□□ -0.15
YIPF4Q9BSR8 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC14.12□□□□□ -0.15
YIPF4Q9BSR8 IGHV3-71-201ENST00000523324 359 ntBASIC14.12□□□□□ -0.15
YIPF4Q9BSR8 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC14.12□□□□□ -0.15
YIPF4Q9BSR8 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
YIPF4Q9BSR8 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
YIPF4Q9BSR8 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
YIPF4Q9BSR8 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
YIPF4Q9BSR8 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
YIPF4Q9BSR8 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC14.12□□□□□ -0.15
YIPF4Q9BSR8 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC14.12□□□□□ -0.15
YIPF4Q9BSR8 WFDC1-204ENST00000613603 549 ntBASIC14.12□□□□□ -0.15
YIPF4Q9BSR8 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC14.12□□□□□ -0.15
YIPF4Q9BSR8 AC005252.2-201ENST00000624630 1141 ntBASIC14.12□□□□□ -0.15
YIPF4Q9BSR8 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC14.12□□□□□ -0.15
YIPF4Q9BSR8 AC005089.1-201ENST00000619486 2241 ntBASIC14.12□□□□□ -0.15
YIPF4Q9BSR8 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
YIPF4Q9BSR8 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
YIPF4Q9BSR8 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
YIPF4Q9BSR8 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
YIPF4Q9BSR8 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
YIPF4Q9BSR8 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC14.12□□□□□ -0.15
YIPF4Q9BSR8 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
YIPF4Q9BSR8 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
YIPF4Q9BSR8 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
YIPF4Q9BSR8 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
YIPF4Q9BSR8 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
YIPF4Q9BSR8 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 73.8 ms