Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 CYP4F11-204ENST00000591841 2531 ntTSL 2 BASIC9.93□□□□□ -0.82
LITAFQ99732 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC9.93□□□□□ -0.82
LITAFQ99732 NISCH-212ENST00000488380 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
LITAFQ99732 UBE2I-204ENST00000397515 3109 ntAPPRIS P1 TSL 3 BASIC9.93□□□□□ -0.82
LITAFQ99732 ELN-222ENST00000458204 3147 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
LITAFQ99732 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC9.93□□□□□ -0.82
LITAFQ99732 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
LITAFQ99732 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
LITAFQ99732 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
LITAFQ99732 MAP7-202ENST00000432797 4375 ntAPPRIS ALT2 TSL 2 BASIC9.93□□□□□ -0.82
LITAFQ99732 TOR1AIP1-201ENST00000271583 3044 ntAPPRIS ALT2 TSL 5 BASIC9.93□□□□□ -0.82
LITAFQ99732 POPDC2-201ENST00000264231 1679 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
LITAFQ99732 AL355102.3-201ENST00000554299 1678 ntBASIC9.93□□□□□ -0.82
LITAFQ99732 THEMIS2-201ENST00000328928 2337 ntTSL 2 BASIC9.93□□□□□ -0.82
LITAFQ99732 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC9.93□□□□□ -0.82
LITAFQ99732 ATG4C-201ENST00000317868 2938 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
LITAFQ99732 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC9.93□□□□□ -0.82
LITAFQ99732 PRR26-202ENST00000441152 2251 ntAPPRIS P1 TSL 2 BASIC9.93□□□□□ -0.82
LITAFQ99732 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
LITAFQ99732 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
LITAFQ99732 AL121723.1-201ENST00000445194 1519 ntBASIC9.92□□□□□ -0.82
LITAFQ99732 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
LITAFQ99732 Z98257.2-202ENST00000641138 1548 ntBASIC9.92□□□□□ -0.82
LITAFQ99732 ZNF519-206ENST00000589498 2117 ntTSL 2 BASIC9.92□□□□□ -0.82
LITAFQ99732 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC9.92□□□□□ -0.82
LITAFQ99732 MYRIP-204ENST00000444716 2678 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
LITAFQ99732 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
LITAFQ99732 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC9.92□□□□□ -0.82
LITAFQ99732 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC9.92□□□□□ -0.82
LITAFQ99732 CARS-214ENST00000529772 2637 ntTSL 2 BASIC9.92□□□□□ -0.82
LITAFQ99732 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC9.92□□□□□ -0.82
LITAFQ99732 KIZ-213ENST00000620891 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
LITAFQ99732 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC9.92□□□□□ -0.82
LITAFQ99732 SERPINI1-201ENST00000295777 1907 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
LITAFQ99732 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
LITAFQ99732 HNRNPUL1-204ENST00000392006 3555 ntAPPRIS P2 TSL 1 (best) BASIC9.92□□□□□ -0.82
LITAFQ99732 MKLN1-203ENST00000421797 2460 ntTSL 2 BASIC9.92□□□□□ -0.82
LITAFQ99732 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC9.92□□□□□ -0.82
LITAFQ99732 REM2-202ENST00000536884 1331 ntTSL 2 BASIC9.92□□□□□ -0.82
LITAFQ99732 ZFAND3-201ENST00000287218 3366 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
LITAFQ99732 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC9.92□□□□□ -0.82
LITAFQ99732 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC9.92□□□□□ -0.82
LITAFQ99732 TMEM41A-203ENST00000421852 2827 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
LITAFQ99732 CCNE2-205ENST00000520509 3330 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
LITAFQ99732 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
LITAFQ99732 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC9.92□□□□□ -0.82
LITAFQ99732 RPS2P28-201ENST00000314255 741 ntBASIC9.92□□□□□ -0.82
LITAFQ99732 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC9.92□□□□□ -0.82
LITAFQ99732 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
LITAFQ99732 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC9.92□□□□□ -0.82
LITAFQ99732 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC9.92□□□□□ -0.82
LITAFQ99732 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC9.92□□□□□ -0.82
LITAFQ99732 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
LITAFQ99732 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC9.92□□□□□ -0.82
LITAFQ99732 KRT18P43-201ENST00000469825 1281 ntBASIC9.92□□□□□ -0.82
LITAFQ99732 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC9.92□□□□□ -0.82
LITAFQ99732 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC9.92□□□□□ -0.82
LITAFQ99732 AL135744.1-201ENST00000565098 629 ntBASIC9.92□□□□□ -0.82
LITAFQ99732 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC9.92□□□□□ -0.82
LITAFQ99732 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC9.92□□□□□ -0.82
LITAFQ99732 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC9.92□□□□□ -0.82
LITAFQ99732 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC9.92□□□□□ -0.82
LITAFQ99732 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC9.92□□□□□ -0.82
LITAFQ99732 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC9.92□□□□□ -0.82
LITAFQ99732 SSH2-211ENST00000590153 570 ntTSL 4 BASIC9.92□□□□□ -0.82
LITAFQ99732 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC9.92□□□□□ -0.82
LITAFQ99732 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC9.92□□□□□ -0.82
LITAFQ99732 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC9.92□□□□□ -0.82
LITAFQ99732 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC9.92□□□□□ -0.82
LITAFQ99732 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
LITAFQ99732 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC9.92□□□□□ -0.82
LITAFQ99732 COBL-205ENST00000441453 3785 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
LITAFQ99732 DMTN-220ENST00000523266 2735 ntTSL 5 BASIC9.92□□□□□ -0.82
LITAFQ99732 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
LITAFQ99732 BAK1-203ENST00000442998 2212 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
LITAFQ99732 MARK2P9-201ENST00000430958 1727 ntBASIC9.92□□□□□ -0.82
LITAFQ99732 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
LITAFQ99732 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
LITAFQ99732 APBA2-212ENST00000561069 3138 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
LITAFQ99732 AC244197.3-201ENST00000422081 2635 ntAPPRIS P1 TSL 2 BASIC9.92□□□□□ -0.82
LITAFQ99732 DLX3-201ENST00000434704 2602 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
LITAFQ99732 FBXL18-201ENST00000382368 3498 ntAPPRIS P2 TSL 5 BASIC9.92□□□□□ -0.82
LITAFQ99732 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
LITAFQ99732 ADGRA1-201ENST00000392606 3438 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
LITAFQ99732 COL18A1-AS1-201ENST00000397787 3425 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
LITAFQ99732 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC9.92□□□□□ -0.82
LITAFQ99732 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
LITAFQ99732 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
LITAFQ99732 SAP30BP-202ENST00000355423 2439 ntTSL 2 BASIC9.92□□□□□ -0.82
LITAFQ99732 PDE9A-202ENST00000328862 1956 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
LITAFQ99732 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
LITAFQ99732 ZBTB20-206ENST00000464560 2816 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
LITAFQ99732 SMPDL3B-202ENST00000373894 1878 ntAPPRIS P4 TSL 1 (best) BASIC9.91□□□□□ -0.82
LITAFQ99732 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC9.91□□□□□ -0.82
LITAFQ99732 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
LITAFQ99732 TBX6-202ENST00000395224 1803 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
LITAFQ99732 FUT6-205ENST00000527106 2211 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
LITAFQ99732 ATP2C2-AS1-201ENST00000565700 2998 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
LITAFQ99732 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
LITAFQ99732 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC9.91□□□□□ -0.82
Retrieved 100 of 98,524 protein–RNA pairs in 63.4 ms