Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC13.99□□□□□ -0.17
NUP43Q8NFH3 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC13.99□□□□□ -0.17
NUP43Q8NFH3 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
NUP43Q8NFH3 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NUP43Q8NFH3 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NUP43Q8NFH3 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
NUP43Q8NFH3 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NUP43Q8NFH3 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
NUP43Q8NFH3 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC13.99□□□□□ -0.17
NUP43Q8NFH3 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC13.99□□□□□ -0.17
NUP43Q8NFH3 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
NUP43Q8NFH3 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC13.99□□□□□ -0.17
NUP43Q8NFH3 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NUP43Q8NFH3 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NUP43Q8NFH3 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
NUP43Q8NFH3 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NUP43Q8NFH3 SERF2-209ENST00000409646 559 ntTSL 4 BASIC13.99□□□□□ -0.17
NUP43Q8NFH3 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
NUP43Q8NFH3 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC13.99□□□□□ -0.17
NUP43Q8NFH3 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC13.99□□□□□ -0.17
NUP43Q8NFH3 AC011495.1-201ENST00000498085 584 ntBASIC13.99□□□□□ -0.17
NUP43Q8NFH3 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC13.99□□□□□ -0.17
NUP43Q8NFH3 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
NUP43Q8NFH3 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC13.99□□□□□ -0.17
NUP43Q8NFH3 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC13.99□□□□□ -0.17
NUP43Q8NFH3 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
NUP43Q8NFH3 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
NUP43Q8NFH3 RPSAP52-203ENST00000622976 1023 ntBASIC13.99□□□□□ -0.17
NUP43Q8NFH3 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC13.99□□□□□ -0.17
NUP43Q8NFH3 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
NUP43Q8NFH3 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NUP43Q8NFH3 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
NUP43Q8NFH3 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
NUP43Q8NFH3 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
NUP43Q8NFH3 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC13.99□□□□□ -0.17
NUP43Q8NFH3 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC13.99□□□□□ -0.17
NUP43Q8NFH3 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC13.99□□□□□ -0.17
NUP43Q8NFH3 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NUP43Q8NFH3 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NUP43Q8NFH3 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NUP43Q8NFH3 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
NUP43Q8NFH3 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
NUP43Q8NFH3 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
NUP43Q8NFH3 AC015802.1-201ENST00000588104 1449 ntBASIC13.98□□□□□ -0.17
NUP43Q8NFH3 UCKL1-AS1-201ENST00000623569 3602 ntBASIC13.98□□□□□ -0.17
NUP43Q8NFH3 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
NUP43Q8NFH3 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
NUP43Q8NFH3 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC13.98□□□□□ -0.17
NUP43Q8NFH3 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NUP43Q8NFH3 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC13.98□□□□□ -0.17
NUP43Q8NFH3 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NUP43Q8NFH3 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
NUP43Q8NFH3 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
NUP43Q8NFH3 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
NUP43Q8NFH3 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC13.98□□□□□ -0.17
NUP43Q8NFH3 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC13.98□□□□□ -0.17
NUP43Q8NFH3 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NUP43Q8NFH3 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC13.98□□□□□ -0.17
NUP43Q8NFH3 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC13.98□□□□□ -0.17
NUP43Q8NFH3 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
NUP43Q8NFH3 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
NUP43Q8NFH3 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC13.98□□□□□ -0.17
NUP43Q8NFH3 AC245100.3-201ENST00000441281 285 ntBASIC13.98□□□□□ -0.17
NUP43Q8NFH3 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC13.98□□□□□ -0.17
NUP43Q8NFH3 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC13.98□□□□□ -0.17
NUP43Q8NFH3 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC13.98□□□□□ -0.17
NUP43Q8NFH3 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC13.98□□□□□ -0.17
NUP43Q8NFH3 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
NUP43Q8NFH3 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC13.98□□□□□ -0.17
NUP43Q8NFH3 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC13.98□□□□□ -0.17
NUP43Q8NFH3 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC13.98□□□□□ -0.17
NUP43Q8NFH3 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC13.98□□□□□ -0.17
NUP43Q8NFH3 AC025048.6-201ENST00000634326 1161 ntBASIC13.98□□□□□ -0.17
NUP43Q8NFH3 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
NUP43Q8NFH3 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NUP43Q8NFH3 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NUP43Q8NFH3 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NUP43Q8NFH3 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NUP43Q8NFH3 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NUP43Q8NFH3 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NUP43Q8NFH3 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
NUP43Q8NFH3 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
NUP43Q8NFH3 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NUP43Q8NFH3 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
NUP43Q8NFH3 FOS-202ENST00000535987 1402 ntTSL 2 BASIC13.98□□□□□ -0.17
NUP43Q8NFH3 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NUP43Q8NFH3 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC13.97□□□□□ -0.17
NUP43Q8NFH3 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
NUP43Q8NFH3 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
NUP43Q8NFH3 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC13.97□□□□□ -0.17
NUP43Q8NFH3 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC13.97□□□□□ -0.17
NUP43Q8NFH3 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
NUP43Q8NFH3 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
NUP43Q8NFH3 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NUP43Q8NFH3 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC13.97□□□□□ -0.17
NUP43Q8NFH3 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NUP43Q8NFH3 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
NUP43Q8NFH3 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NUP43Q8NFH3 AGGF1P1-201ENST00000509500 2073 ntBASIC13.97□□□□□ -0.17
NUP43Q8NFH3 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC13.97□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 65.6 ms