Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.1
RNF43Q68DV7 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
RNF43Q68DV7 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC15.71■□□□□ 0.1
RNF43Q68DV7 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
RNF43Q68DV7 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC15.71■□□□□ 0.1
RNF43Q68DV7 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.1
RNF43Q68DV7 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
RNF43Q68DV7 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC15.7■□□□□ 0.1
RNF43Q68DV7 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC15.7■□□□□ 0.1
RNF43Q68DV7 BX640514.1-201ENST00000583223 1918 ntBASIC15.7■□□□□ 0.1
RNF43Q68DV7 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RNF43Q68DV7 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RNF43Q68DV7 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RNF43Q68DV7 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC15.7■□□□□ 0.1
RNF43Q68DV7 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC15.7■□□□□ 0.1
RNF43Q68DV7 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RNF43Q68DV7 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
RNF43Q68DV7 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
RNF43Q68DV7 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
RNF43Q68DV7 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC15.7■□□□□ 0.1
RNF43Q68DV7 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC15.7■□□□□ 0.1
RNF43Q68DV7 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RNF43Q68DV7 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RNF43Q68DV7 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RNF43Q68DV7 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RNF43Q68DV7 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
RNF43Q68DV7 CD8B2-202ENST00000417670 633 ntBASIC15.7■□□□□ 0.1
RNF43Q68DV7 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC15.7■□□□□ 0.1
RNF43Q68DV7 HLA-K-203ENST00000430151 1046 ntBASIC15.7■□□□□ 0.1
RNF43Q68DV7 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
RNF43Q68DV7 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RNF43Q68DV7 AC006033.1-201ENST00000440505 426 ntBASIC15.7■□□□□ 0.1
RNF43Q68DV7 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC15.7■□□□□ 0.1
RNF43Q68DV7 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC15.7■□□□□ 0.1
RNF43Q68DV7 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC15.7■□□□□ 0.1
RNF43Q68DV7 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC15.7■□□□□ 0.1
RNF43Q68DV7 FOS-206ENST00000555347 1280 ntTSL 2 BASIC15.7■□□□□ 0.1
RNF43Q68DV7 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC15.7■□□□□ 0.1
RNF43Q68DV7 C2orf69P2-201ENST00000562032 1123 ntBASIC15.7■□□□□ 0.1
RNF43Q68DV7 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC15.7■□□□□ 0.1
RNF43Q68DV7 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC15.7■□□□□ 0.1
RNF43Q68DV7 RN7SL48P-201ENST00000579283 293 ntBASIC15.7■□□□□ 0.1
RNF43Q68DV7 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC15.7■□□□□ 0.1
RNF43Q68DV7 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
RNF43Q68DV7 AC106872.11-201ENST00000605838 421 ntBASIC15.7■□□□□ 0.1
RNF43Q68DV7 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC15.7■□□□□ 0.1
RNF43Q68DV7 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RNF43Q68DV7 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC15.7■□□□□ 0.1
RNF43Q68DV7 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC15.7■□□□□ 0.1
RNF43Q68DV7 HSPA7-201ENST00000445535 1927 ntBASIC15.7■□□□□ 0.1
RNF43Q68DV7 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
RNF43Q68DV7 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RNF43Q68DV7 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC15.7■□□□□ 0.1
RNF43Q68DV7 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
RNF43Q68DV7 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RNF43Q68DV7 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RNF43Q68DV7 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
RNF43Q68DV7 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RNF43Q68DV7 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RNF43Q68DV7 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC15.69■□□□□ 0.1
RNF43Q68DV7 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RNF43Q68DV7 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RNF43Q68DV7 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RNF43Q68DV7 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
RNF43Q68DV7 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RNF43Q68DV7 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC15.69■□□□□ 0.1
RNF43Q68DV7 AC117489.1-201ENST00000625169 3217 ntBASIC15.69■□□□□ 0.1
RNF43Q68DV7 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RNF43Q68DV7 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
RNF43Q68DV7 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RNF43Q68DV7 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RNF43Q68DV7 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC15.69■□□□□ 0.1
RNF43Q68DV7 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
RNF43Q68DV7 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC15.69■□□□□ 0.1
RNF43Q68DV7 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC15.69■□□□□ 0.1
RNF43Q68DV7 RPS15-201ENST00000233609 534 ntTSL 2 BASIC15.69■□□□□ 0.1
RNF43Q68DV7 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RNF43Q68DV7 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RNF43Q68DV7 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RNF43Q68DV7 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RNF43Q68DV7 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RNF43Q68DV7 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC15.69■□□□□ 0.1
RNF43Q68DV7 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
RNF43Q68DV7 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC15.69■□□□□ 0.1
RNF43Q68DV7 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
RNF43Q68DV7 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC15.69■□□□□ 0.1
RNF43Q68DV7 IGHJ2P-201ENST00000454480 60 ntBASIC15.69■□□□□ 0.1
RNF43Q68DV7 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RNF43Q68DV7 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC15.69■□□□□ 0.1
RNF43Q68DV7 ZNF767P-206ENST00000513792 565 ntBASIC15.69■□□□□ 0.1
RNF43Q68DV7 RPL8-205ENST00000527914 551 ntTSL 3 BASIC15.69■□□□□ 0.1
RNF43Q68DV7 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RNF43Q68DV7 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC15.69■□□□□ 0.1
RNF43Q68DV7 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC15.69■□□□□ 0.1
RNF43Q68DV7 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC15.69■□□□□ 0.1
RNF43Q68DV7 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC15.69■□□□□ 0.1
RNF43Q68DV7 RPS15-205ENST00000586686 562 ntTSL 5 BASIC15.69■□□□□ 0.1
RNF43Q68DV7 RPS15-208ENST00000591804 711 ntTSL 5 BASIC15.69■□□□□ 0.1
RNF43Q68DV7 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
RNF43Q68DV7 AC008687.7-202ENST00000637404 953 ntBASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms