Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
H3F3AP84243 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
H3F3AP84243 ANKRD19P-201ENST00000338192 862 ntBASIC13.36□□□□□ -0.27
H3F3AP84243 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
H3F3AP84243 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
H3F3AP84243 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
H3F3AP84243 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
H3F3AP84243 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
H3F3AP84243 RN7SKP175-201ENST00000408472 289 ntBASIC13.36□□□□□ -0.27
H3F3AP84243 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
H3F3AP84243 FAM8A4P-201ENST00000435433 1213 ntBASIC13.36□□□□□ -0.27
H3F3AP84243 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC13.36□□□□□ -0.27
H3F3AP84243 CTBP2P5-201ENST00000454986 1264 ntBASIC13.36□□□□□ -0.27
H3F3AP84243 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
H3F3AP84243 ALG3P1-201ENST00000508806 1114 ntBASIC13.36□□□□□ -0.27
H3F3AP84243 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
H3F3AP84243 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC13.36□□□□□ -0.27
H3F3AP84243 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC13.36□□□□□ -0.27
H3F3AP84243 VPS18-202ENST00000558474 873 ntTSL 3 BASIC13.36□□□□□ -0.27
H3F3AP84243 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC13.36□□□□□ -0.27
H3F3AP84243 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
H3F3AP84243 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
H3F3AP84243 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC13.36□□□□□ -0.27
H3F3AP84243 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
H3F3AP84243 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC13.36□□□□□ -0.27
H3F3AP84243 AC008687.7-202ENST00000637404 953 ntBASIC13.36□□□□□ -0.27
H3F3AP84243 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC13.36□□□□□ -0.27
H3F3AP84243 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC13.36□□□□□ -0.27
H3F3AP84243 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC13.36□□□□□ -0.27
H3F3AP84243 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
H3F3AP84243 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
H3F3AP84243 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
H3F3AP84243 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
H3F3AP84243 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC13.36□□□□□ -0.27
H3F3AP84243 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
H3F3AP84243 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
H3F3AP84243 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
H3F3AP84243 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
H3F3AP84243 AC020910.5-201ENST00000623668 1865 ntBASIC13.36□□□□□ -0.27
H3F3AP84243 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
H3F3AP84243 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
H3F3AP84243 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
H3F3AP84243 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC13.35□□□□□ -0.27
H3F3AP84243 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC13.35□□□□□ -0.27
H3F3AP84243 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC13.35□□□□□ -0.27
H3F3AP84243 AC106881.1-201ENST00000605849 3329 ntBASIC13.35□□□□□ -0.27
H3F3AP84243 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
H3F3AP84243 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
H3F3AP84243 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
H3F3AP84243 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC13.35□□□□□ -0.27
H3F3AP84243 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
H3F3AP84243 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC13.35□□□□□ -0.27
H3F3AP84243 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC13.35□□□□□ -0.27
H3F3AP84243 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC13.35□□□□□ -0.27
H3F3AP84243 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
H3F3AP84243 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC13.35□□□□□ -0.27
H3F3AP84243 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC13.35□□□□□ -0.27
H3F3AP84243 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
H3F3AP84243 AC022210.1-201ENST00000449856 793 ntBASIC13.35□□□□□ -0.27
H3F3AP84243 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC13.35□□□□□ -0.27
H3F3AP84243 GCOM2-201ENST00000509133 1104 ntBASIC13.35□□□□□ -0.27
H3F3AP84243 AC104989.1-201ENST00000519711 778 ntBASIC13.35□□□□□ -0.27
H3F3AP84243 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC13.35□□□□□ -0.27
H3F3AP84243 SNX29P1-201ENST00000548357 1007 ntBASIC13.35□□□□□ -0.27
H3F3AP84243 C2orf69P2-201ENST00000562032 1123 ntBASIC13.35□□□□□ -0.27
H3F3AP84243 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC13.35□□□□□ -0.27
H3F3AP84243 RPS24-214ENST00000613865 538 ntTSL 5 BASIC13.35□□□□□ -0.27
H3F3AP84243 MIR6775-201ENST00000617557 69 ntBASIC13.35□□□□□ -0.27
H3F3AP84243 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
H3F3AP84243 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
H3F3AP84243 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
H3F3AP84243 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
H3F3AP84243 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
H3F3AP84243 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
H3F3AP84243 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC13.35□□□□□ -0.27
H3F3AP84243 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
H3F3AP84243 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
H3F3AP84243 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
H3F3AP84243 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
H3F3AP84243 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
H3F3AP84243 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
H3F3AP84243 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
H3F3AP84243 AHCYP2-201ENST00000430630 1300 ntBASIC13.35□□□□□ -0.27
H3F3AP84243 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
H3F3AP84243 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
H3F3AP84243 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
H3F3AP84243 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC13.35□□□□□ -0.27
H3F3AP84243 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
H3F3AP84243 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC13.34□□□□□ -0.27
H3F3AP84243 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
H3F3AP84243 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
H3F3AP84243 MX1-218ENST00000619682 1980 ntTSL 5 BASIC13.34□□□□□ -0.27
H3F3AP84243 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
H3F3AP84243 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
H3F3AP84243 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
H3F3AP84243 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
H3F3AP84243 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
H3F3AP84243 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
H3F3AP84243 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC13.34□□□□□ -0.27
H3F3AP84243 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC13.34□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 55.2 ms