Protein–RNA interactions for Protein: P54750

PDE1A, Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A, humanhuman

Predictions only

Length 535 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1AP54750 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PDE1AP54750 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PDE1AP54750 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PDE1AP54750 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PDE1AP54750 LBX2-201ENST00000341396 886 ntTSL 3 BASIC18.15■□□□□ 0.5
PDE1AP54750 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
PDE1AP54750 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
PDE1AP54750 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PDE1AP54750 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PDE1AP54750 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC18.15■□□□□ 0.5
PDE1AP54750 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC18.15■□□□□ 0.5
PDE1AP54750 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC18.15■□□□□ 0.5
PDE1AP54750 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC18.15■□□□□ 0.5
PDE1AP54750 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
PDE1AP54750 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
PDE1AP54750 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC18.15■□□□□ 0.5
PDE1AP54750 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PDE1AP54750 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
PDE1AP54750 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
PDE1AP54750 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC18.15■□□□□ 0.5
PDE1AP54750 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
PDE1AP54750 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
PDE1AP54750 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
PDE1AP54750 GSN-209ENST00000449733 2702 ntTSL 2 BASIC18.15■□□□□ 0.5
PDE1AP54750 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PDE1AP54750 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
PDE1AP54750 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
PDE1AP54750 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PDE1AP54750 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PDE1AP54750 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PDE1AP54750 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PDE1AP54750 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PDE1AP54750 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PDE1AP54750 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PDE1AP54750 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
PDE1AP54750 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC18.15■□□□□ 0.5
PDE1AP54750 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC18.15■□□□□ 0.5
PDE1AP54750 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
PDE1AP54750 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.5
PDE1AP54750 AC090505.1-201ENST00000430515 1834 ntBASIC18.14■□□□□ 0.5
PDE1AP54750 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
PDE1AP54750 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PDE1AP54750 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PDE1AP54750 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.49
PDE1AP54750 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC18.14■□□□□ 0.49
PDE1AP54750 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PDE1AP54750 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
PDE1AP54750 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PDE1AP54750 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PDE1AP54750 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
PDE1AP54750 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PDE1AP54750 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
PDE1AP54750 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC18.14■□□□□ 0.49
PDE1AP54750 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC18.14■□□□□ 0.49
PDE1AP54750 PUDPP3-201ENST00000445368 636 ntBASIC18.14■□□□□ 0.49
PDE1AP54750 GAPDHP21-201ENST00000450301 1010 ntBASIC18.14■□□□□ 0.49
PDE1AP54750 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
PDE1AP54750 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PDE1AP54750 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC18.14■□□□□ 0.49
PDE1AP54750 AP000812.2-201ENST00000538934 718 ntBASIC18.14■□□□□ 0.49
PDE1AP54750 APRT-204ENST00000563655 709 ntTSL 5 BASIC18.14■□□□□ 0.49
PDE1AP54750 ORC6-206ENST00000568364 888 ntTSL 5 BASIC18.14■□□□□ 0.49
PDE1AP54750 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
PDE1AP54750 WNT11-204ENST00000621122 789 ntTSL 5 BASIC18.14■□□□□ 0.49
PDE1AP54750 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PDE1AP54750 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PDE1AP54750 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
PDE1AP54750 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PDE1AP54750 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
PDE1AP54750 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
PDE1AP54750 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC18.14■□□□□ 0.49
PDE1AP54750 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
PDE1AP54750 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PDE1AP54750 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PDE1AP54750 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
PDE1AP54750 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
PDE1AP54750 PDIA3P1-201ENST00000471856 1510 ntBASIC18.13■□□□□ 0.49
PDE1AP54750 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PDE1AP54750 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PDE1AP54750 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PDE1AP54750 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC18.13■□□□□ 0.49
PDE1AP54750 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
PDE1AP54750 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC18.13■□□□□ 0.49
PDE1AP54750 OS9-204ENST00000389146 2091 ntTSL 2 BASIC18.13■□□□□ 0.49
PDE1AP54750 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PDE1AP54750 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC18.13■□□□□ 0.49
PDE1AP54750 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PDE1AP54750 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PDE1AP54750 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
PDE1AP54750 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PDE1AP54750 RN7SL832P-201ENST00000607781 1756 ntBASIC18.13■□□□□ 0.49
PDE1AP54750 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PDE1AP54750 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PDE1AP54750 USB1-202ENST00000423271 1217 ntTSL 2 BASIC18.13■□□□□ 0.49
PDE1AP54750 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PDE1AP54750 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC18.13■□□□□ 0.49
PDE1AP54750 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC18.13■□□□□ 0.49
PDE1AP54750 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PDE1AP54750 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC18.13■□□□□ 0.49
PDE1AP54750 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms