Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
PTPN3P26045 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
PTPN3P26045 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC15.21■□□□□ 0.03
PTPN3P26045 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC15.21■□□□□ 0.03
PTPN3P26045 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
PTPN3P26045 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC15.21■□□□□ 0.03
PTPN3P26045 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PTPN3P26045 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PTPN3P26045 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PTPN3P26045 MVK-214ENST00000629016 1591 ntTSL 5 BASIC15.21■□□□□ 0.03
PTPN3P26045 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC15.21■□□□□ 0.03
PTPN3P26045 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC15.21■□□□□ 0.03
PTPN3P26045 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PTPN3P26045 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC15.21■□□□□ 0.03
PTPN3P26045 GUK1-206ENST00000366723 845 ntTSL 5 BASIC15.21■□□□□ 0.03
PTPN3P26045 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
PTPN3P26045 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC15.21■□□□□ 0.03
PTPN3P26045 TAF8-206ENST00000472818 719 ntTSL 2 BASIC15.21■□□□□ 0.03
PTPN3P26045 AL391280.1-201ENST00000506969 1062 ntBASIC15.21■□□□□ 0.03
PTPN3P26045 GCOM2-201ENST00000509133 1104 ntBASIC15.21■□□□□ 0.03
PTPN3P26045 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC15.21■□□□□ 0.03
PTPN3P26045 AC233724.13-201ENST00000598383 410 ntBASIC15.21■□□□□ 0.03
PTPN3P26045 ECM1P1-201ENST00000604092 1279 ntBASIC15.21■□□□□ 0.03
PTPN3P26045 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC15.21■□□□□ 0.03
PTPN3P26045 AC132938.4-201ENST00000623835 848 ntBASIC15.21■□□□□ 0.03
PTPN3P26045 AL358472.5-202ENST00000641448 1267 ntBASIC15.21■□□□□ 0.03
PTPN3P26045 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
PTPN3P26045 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
PTPN3P26045 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
PTPN3P26045 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
PTPN3P26045 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC15.21■□□□□ 0.03
PTPN3P26045 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
PTPN3P26045 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.02
PTPN3P26045 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
PTPN3P26045 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PTPN3P26045 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC15.2■□□□□ 0.02
PTPN3P26045 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PTPN3P26045 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
PTPN3P26045 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
PTPN3P26045 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
PTPN3P26045 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
PTPN3P26045 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
PTPN3P26045 FKBP4P6-201ENST00000457486 1332 ntBASIC15.2■□□□□ 0.02
PTPN3P26045 MRPL37P1-201ENST00000592451 1337 ntBASIC15.2■□□□□ 0.02
PTPN3P26045 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC15.2■□□□□ 0.02
PTPN3P26045 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
PTPN3P26045 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PTPN3P26045 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PTPN3P26045 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC15.2■□□□□ 0.02
PTPN3P26045 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC15.2■□□□□ 0.02
PTPN3P26045 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
PTPN3P26045 OR2I1P-209ENST00000641730 5365 ntBASIC15.2■□□□□ 0.02
PTPN3P26045 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC15.2■□□□□ 0.02
PTPN3P26045 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
PTPN3P26045 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PTPN3P26045 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
PTPN3P26045 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
PTPN3P26045 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
PTPN3P26045 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC15.2■□□□□ 0.02
PTPN3P26045 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
PTPN3P26045 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC15.2■□□□□ 0.02
PTPN3P26045 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC15.2■□□□□ 0.02
PTPN3P26045 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC15.2■□□□□ 0.02
PTPN3P26045 FTLP10-202ENST00000505798 471 ntBASIC15.2■□□□□ 0.02
PTPN3P26045 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC15.2■□□□□ 0.02
PTPN3P26045 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
PTPN3P26045 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
PTPN3P26045 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PTPN3P26045 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC15.2■□□□□ 0.02
PTPN3P26045 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC15.2■□□□□ 0.02
PTPN3P26045 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC15.2■□□□□ 0.02
PTPN3P26045 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC15.2■□□□□ 0.02
PTPN3P26045 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC15.2■□□□□ 0.02
PTPN3P26045 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
PTPN3P26045 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
PTPN3P26045 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
PTPN3P26045 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PTPN3P26045 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
PTPN3P26045 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PTPN3P26045 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
PTPN3P26045 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
PTPN3P26045 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
PTPN3P26045 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PTPN3P26045 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
PTPN3P26045 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PTPN3P26045 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
PTPN3P26045 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC15.2■□□□□ 0.02
PTPN3P26045 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PTPN3P26045 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC15.2■□□□□ 0.02
PTPN3P26045 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PTPN3P26045 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PTPN3P26045 UCKL1-AS1-201ENST00000623569 3602 ntBASIC15.19■□□□□ 0.02
PTPN3P26045 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PTPN3P26045 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC15.19■□□□□ 0.02
PTPN3P26045 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
PTPN3P26045 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC15.19■□□□□ 0.02
PTPN3P26045 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PTPN3P26045 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
PTPN3P26045 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PTPN3P26045 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms